Gene detail

Detail information of GWHGAAEX012135/evm.TU.scaffold_40.102

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|430744853\|ref\|YP_007203982.1\|	4.00E-06	lipase [Singulisphaera acidiphila DSM 18658]
nr	gi\|743813842\|ref\|XP_010929842.1\|	0	PREDICTED: uncharacterized protein LOC105051217 [Elaeis guineensis]
Swissprot	tr\|Q9SU71\|EDSBC_ARATH	5.00E-09	Protein EDS1B {ECO:0000305}
trEMBL	tr\|J3LCW2\|J3LCW2_ORYBR	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB02G24790.1}
TAIR	AT3G07400	0	lipase class 3 family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000038	4639367	4699859	-

Transcript Sequence
>GWHTAAEX012135 GCAATTTGGAGGCCATTTAAGATGACGCGTTCGAACTGTTGTTTTGATTCAATTTTTTGAAAGATTTATGTGCGTAACATTCTAATCCGCAGTGAGCTAGTTTTGTGTCTATGATGTCTTCAATTCTAGTGCATAGGCGAAGCCCTTGTGTATTTTCTGATTTCTCATGATTTGTTTTAGTTAGATTTTGGTCTTCAGGAATTAGCATTTGGTTTGATGTGTGCAAATTTAGGAGTCCCGATTACTTGACTACATTAACATTAGGCTTGTTAACTTGCTTTTTCATTAGCATTTAAATTAACGAAAAAACGTGTACAGTGATTCTAAACCCTTGTGCCTATTGAATAATTATTTGCCTTACAAAAACATCATCTTCTTTTTTATCGGCTTTCCTATCCTGCTCTTTTTCACTGTTTCTAACAAAGCTAGCGCAGTTCATTCATTTAACGGGCTAATTAGTTATTATGCAGAAGTACTATAAGCTTTAATTATGGGGTATTAAAAGGGAATTGTGTATTCGGAGTTTGCAGATATTCTTCCTCACAAACTATACACTGTTTGGTAGTCACGGGTTTGATGTTTACAGTTCTCAATATGGTTCCATTTACTTGCCTGTCCAATTATATCAAACAAAATATAGGTTTGGATTGTAAATTTCATAAATTCTCTTATGTCAGCATCCTGCAACTGAGATGATACGAGCAATCAACAAGTTCAAGTCGGATTTTGGTGGGCAACTTGTTTCCCTTGAGCGTGTTCAATATTCTTTGGATCATGTGCCCCATCGGTATCTATTGGCTGAGGCTGGTGACACTCTGTTTGCTTCATTTATTGGAACTAAACAATACAAGGATGTTATTACCGATGCAAACATTTTCCAAGGGGCTATATTTCATGAAGATAATGAAGAAGATTTGGAATCGCTTGATGTTATGGAAAATGGAGTAGACAGACAAAAGAAGATTGAAGAAAATTTTGTAAATTCTCTGAACGGAAAACCCAAGAAACTCCAAAAAAAAGCTAAACCTGCTGCTCACAGGGGATTTTTAGCCCGTGCTAAAGGAATACCAGCTTTGGAGATTTACAGACTTGCGCAGAAAAAAAATAGAAAGCTAATCCTTTGCGGTCATTCACTTGGTGGTGCAGTAGCTGTGTTGGTCACACTAGCAATTTTGAGAGTTTTTGCATCGTCTTCCATTTCTAAAGAGCATGGAAAAATTCAAGTAAAGTGCATTACCTTCTCCCAGCCACCAGTTGGGAATGCTGCGCTGAAAGATTATGTTCATCAGAAAGGATGGCAGAAGTATTTTAAATCCTACTGCATTCCAGAAGATCTGGTGCCACGCATTTTGTCTCCATCATATTTTCATCACTATAGCTTACATACTCTTCAATCAACTTGTGATTCTGTACTTGAAAATACGTCAGTGGTTAGCTCTGCCAATGATACTATAAAATCACAATCACTGAAATCTAGAGATAAAGGTGGAGAGCAGCTTGTGTTGGGCCTGGGCCCAGTTAAGATGTCATTAAGGAGATTATCCAAACTAGTTCCCGTTGAGGGTGTCCAGAAGCATTTAAGCATACTTCGAAGAGTGGGAAGTGAAGATGGAAAGCTGTCATCTGTTTCTAGTCATAGACCAACATTAACACTTGCTGTTGCTGAAGCTAAACCAGAATCCCTTGAGACCCAAGAAGGAGCTGATGGTACCCCCCTTAAACTGATTTCTAACGCTGGGGCATCGTCTTCTGAAGGAAATAATAAATTATTCAATGGAAAAAGTGGTATCGAGTCTGGGGATATTAGTAAATGGAAGAGGGTTCCTTATTTACCTTCATATGTACCATTTGGTCAGCTATTTCTCTTGGGAAGCTGTTCGGTGGAGTTGCTTTCAGATGCTGAGTACTCTAAATTAATATCGGTGAGTTCTGCTATTTCAGAACTGAAGGAACGGTTGCAATTACATTCAATGAAGTCATATCGATCACGCTTTCATAAAATATATGAACAGTTTCTCTGCATAAATGCTGCTTCATTTCTTGGTATAGATCAGCTGCCACAGTTTCCACATTTGCAACAGTTGCTTGGTCTGAGTGATGTTGGTTCTGTAGAACTTGGTCATATAATTGATGCTCCTATAATTCGAACGGCAACGACTATCCTTCCTCTTGGATGGAGTGGGATACTGGGCAATAAGAATGCTGAACATCTTAAAGTTGATATAATTGGCCATGGATTGCACATGTGTAAACAATTTCAAGCACAAATAAATGGGAAATGGTTTTCAGCAGTGGTTGAGTCATCACCATCCATGCCTTCGTATTCATCGAATTTTCATACACAACCTGATTTACAGAAGATGCGTGTTCTGATTGGCTCTCCTATAAAAAGGCCGCCAATATATCCTACACATGAAGAAATATTGCCTATGGTGCCTTGTCCATCTACGAAGTGTATTGATAACGTTATGCCTGAAGACTGTTCCAGTTCTTCAACTTGGGAAGGCTTATCTAGCTTTGTTGTTTACTGCACCAGTGATTTTATCTCCGTTCCAAAGCAGGTTCATGTTAGAGTTCGTCGGGTGCGACTACTTGGGCTTGCGGGCTCTGGGAAAACTTCCCTACTGAAAGCAGTATCGGATCAAAGTAGTAGAGGAGCTTTTGCAAATGTCCAATGGATTCATCGGGAGGACTGCTTCATCGATGGATTATTCTATCTCGATTCAGCAGGAGTAAACATGCAGGAATTGGGGTCGGAGGCCAGGAAGTTCAGCAAAGAACTACGGGAAGGCGCAGGCGATCTGAGCAAGAAAATCGACCTGGTCGTGGTCGTCCACAACCTCTCGCAGCAGATACCGAAGCATGGCTTCTCCGCCCTCCTGAGCGACGCAAAGGCTTCGGGCATCCCTTGGGTTTTGGCCATCACGAACAAATTCTCGGTGGGCTCTCGTGAGCAGAAGCTGCTGGTCAAGTCTGCCATGCAGGCCTACGAGGTGCACCCCGCCATTACTGAGGTCATCAACTCCTCCCCTTTTGTCGTGCCCTGTGCATCTACCTCTGCCCTGCCGGAGAATGCTGTGGCACGCCGAATGACTGCTCTGAAAATAATTCTCGCCCCCATCAATATCGCCCGGATACCCTTTCAGAGGAAGGACTTGATCTTCCCTCTCGAGGGGGTCGCCGCTTTTAGAAAACTCGTGCACCATGTTCTTCGCAGCCACGAGGAGATGGCCATCCAAGAGCTTGCGAATGAGAGGCTTTCACTAGAACTTGCAAGGGAAAGAAAGGCTGCGATGGAGGCCAAATCTGTTTCTCAGGAAAAGGGGAGGTCAGACACGGCGGCCGCAGTGGGGGGGGCATCTCTCGGAGCCGGCCTTGGCCTAATATTGGCTGTCGTCATGGGAGCCGCCTCTGCCTTGCGGAAACCCTAG

Network for GWHGAAEX012135

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01764.24	Lipase_3	45	219	2.00E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.510
SRP064423	SRR2545915	Juvenile tuber	17.310
SRP108465	SRR5643513	five period of Gastrodia elata	11.630
	SRR5643514	five period of Gastrodia elata	13.180
	SRR5643515	five period of Gastrodia elata	11.870
	SRR5643524	five period of Gastrodia elata	13.820
	SRR5643525	five period of Gastrodia elata	16.750
	SRR5643528	five period of Gastrodia elata	18.530
	SRR5643658	five period of Gastrodia elata	18.680
	SRR5643659	five period of Gastrodia elata	7.570
	SRR5643660	five period of Gastrodia elata	9.560
	SRR5643661	five period of Gastrodia elata	7.100
	SRR5643662	five period of Gastrodia elata	9.020
	SRR5643663	five period of Gastrodia elata	8.450
	SRR5643664	five period of Gastrodia elata	11.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.840
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.160
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	28.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.420
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.720
SRP279888	Gastro	Gastrodia elata tuber	11.37
	Juven	Juvenile tuber	8.55
	Mother_Gastro	Mother tuber of Gastrodia elata	22.18
	Mother_Juven	Mother tuber of Juvenile	12.52