Detail information of GWHGAAEX012137/evm.TU.scaffold_40.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743814756|ref|XP_010930143.1|6.18E-172PREDICTED: cycloeucalenol cycloisomerase-like [Elaeis guineensis]
Swissprottr|Q9M643|CCI1_ARATH7.00E-163Cycloeucalenol cycloisomerase
trEMBLtr|M0T8W9|M0T8W9_MUSAM4.00E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P21210_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003850286075072626-
Transcript Sequence

Network for GWHGAAEX012137

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K08246CPI1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Steroid biosynthesismap00100

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.810
SRR2545915Juvenile tuber7.190
SRP108465SRR5643513five period of Gastrodia elata11.880
SRR5643514five period of Gastrodia elata14.510
SRR5643515five period of Gastrodia elata11.910
SRR5643524five period of Gastrodia elata13.610
SRR5643525five period of Gastrodia elata7.870
SRR5643528five period of Gastrodia elata10.380
SRR5643658five period of Gastrodia elata8.950
SRR5643659five period of Gastrodia elata8.500
SRR5643660five period of Gastrodia elata10.980
SRR5643661five period of Gastrodia elata9.780
SRR5643662five period of Gastrodia elata6.990
SRR5643663five period of Gastrodia elata7.290
SRR5643664five period of Gastrodia elata5.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.400
SRR6049655Rhizomagastrodiae_C368-T10_good_111.920
SRR6049656Rhizomagastrodiae_C368-T07_good_112.690
SRR6049657Rhizomagastrodiae_C368-T07_good_110.280
SRR6049658Rhizomagastrodiae_C368-T04_good_18.020
SRR6049659Rhizomagastrodiae_C368-T04_good_17.790
SRR6049660Rhizomagastrodiae_C368-T01_good_110.710
SRR6049661Rhizomagastrodiae_C368-T04_good_111.080
SRR6049662Rhizomagastrodiae_C368-T01_good_119.000
SRR6049663Rhizomagastrodiae_C368-T01_good_114.260
SRR6049664Rhizomagastrodiae_C368-T10_good_117.510
SRR6049665Rhizomagastrodiae_C368-T10_good_117.510
SRP279888GastroGastrodia elata tuber 5.68
JuvenJuvenile tuber6.73
Mother_GastroMother tuber of Gastrodia elata 7.85
Mother_JuvenMother tuber of Juvenile 6.81