Detail information of GWHGAAEX012139/evm.TU.scaffold_40.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743814771|ref|XP_010930149.1|7.32E-115PREDICTED: transcription factor bHLH129-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8H102|BH128_ARATH2.00E-57Transcription factor bHLH128
trEMBLtr|M0S3M8|M0S3M8_MUSAM9.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P27710_001}
TAIRAT1G05800_22.00E-52Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003852116095245888-
Transcript Sequence

Network for GWHGAAEX012139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH2763212.90E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.290
SRR2545915Juvenile tuber28.440
SRP108465SRR5643513five period of Gastrodia elata24.170
SRR5643514five period of Gastrodia elata23.780
SRR5643515five period of Gastrodia elata21.290
SRR5643524five period of Gastrodia elata24.250
SRR5643525five period of Gastrodia elata32.290
SRR5643528five period of Gastrodia elata44.070
SRR5643658five period of Gastrodia elata38.470
SRR5643659five period of Gastrodia elata14.410
SRR5643660five period of Gastrodia elata14.820
SRR5643661five period of Gastrodia elata14.300
SRR5643662five period of Gastrodia elata14.030
SRR5643663five period of Gastrodia elata14.550
SRR5643664five period of Gastrodia elata17.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.700
SRR6049655Rhizomagastrodiae_C368-T10_good_122.470
SRR6049656Rhizomagastrodiae_C368-T07_good_121.780
SRR6049657Rhizomagastrodiae_C368-T07_good_126.500
SRR6049658Rhizomagastrodiae_C368-T04_good_126.390
SRR6049659Rhizomagastrodiae_C368-T04_good_129.620
SRR6049660Rhizomagastrodiae_C368-T01_good_124.020
SRR6049661Rhizomagastrodiae_C368-T04_good_128.080
SRR6049662Rhizomagastrodiae_C368-T01_good_116.160
SRR6049663Rhizomagastrodiae_C368-T01_good_117.520
SRR6049664Rhizomagastrodiae_C368-T10_good_120.990
SRR6049665Rhizomagastrodiae_C368-T10_good_120.990
SRP279888GastroGastrodia elata tuber 23.61
JuvenJuvenile tuber23.32
Mother_GastroMother tuber of Gastrodia elata 60.32
Mother_JuvenMother tuber of Juvenile 46.50