Gene detail

Detail information of GWHGAAEX012150/evm.TU.scaffold_41.15

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743824507\|ref\|XP_010932797.1\|	0	PREDICTED: restin homolog [Elaeis guineensis]
trEMBL	tr\|W4ZTN5\|W4ZTN5_WHEAT	3.00E-146	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Traes_1AL_E60FA09AE.2}
TAIR	AT1G03080	8.00E-69	kinase interacting (KIP1-like) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000040	965253	1026129	+

Transcript Sequence
>GWHTAAEX012150 TGCTGGATTAACTTTTCCCACTTAGTAATTGCGCCTTTTTTTTTTCTTGTGCTCAGTCTCAGCTCAGTTTTACACCTTCCAGTAGCTGCTACGGCTTGTCCCTTAGTACAGCTTGAAGGTCAATGTGATTCTCTTTCATTCGTTTTCGCCGTACTGGGCTTCTTCCGATTAATGTTGTCGGAGATTTGTAAGGGATGGAACTGAGGAGCCATTCTGGATCATGTGCATACTTCTGTTCCCAAGCGCAAATCTGTTTCCTTCGCCATTTAAAATTACAGTTGTTTGAACTATTGCCCCACTTTTGTTGGGAATAGAATCACACTGTTCCAATATTTTTGGAATCATGTCAACTTTTATGCACGCGGAGCCAAGGAGATCATATTCATGGTGGTGGGGCAGTCATATCAGTCCTAAGAATTCAAAATGGCTTCAGGAGAACCTTACAGATATGGACTTGAAAGTAAAAGCAATGATCAAACTCATAGAGGAGGATGCCGACTCCTTTGCAAGGAGAGCGGAAATGTTCTATAAGAAACGACCTGAGCTTATAAAGTATGTGGAGGATATTTACCGAGCATACCGGGCCTTATCTGAAAGATATGATCATGCAACTGGGGCACTACGCCATGCTCATCGAACTATTGCTGAAACTTTCCCAAATCACATTCCACTTGCATTGCCTGATGAGTCTCCTTCTATTTCTCCCAGCACTGAGATGGTGCTATGCACTCCAGAGACACCTTCATCCTTGCATCTATTTAATCCTGACGACCTGCAGAAAGGTGCATTGGGTGGGCCAGAATATTTTCATATTGATAATGAGAATGTGCCATATGCTGATCAAAATGATTTATTTGAAGCAAAAAAAGGGCTGAAGCAGTTAAAGGAGTTGTTTGCTCCTCGGGAACTGACAAACCGTGTGAAATTTCATGAAGGGAAGGCAAGAAAAGGCCTTATTTTTCAGGAGGAAGAGGAATGTGTTTCCGAGTCTCAACTTTCTATTCAGGAGAAAGAGAATGCAAATATTGAAATAGAACGTCTTCAAGAAGAAGTTTCGCTGCTTTCAATTGAGAATCAAAAACTAAAGATTCAGATAAAATCACAATCAATGAGCTTAGATTCGTCCAGAACTGAATCTCAAATGCTGAGAGATGCAATTACCAAATTAGAGTCTGAAATGGATGCTGCTTTTCTTAAGAACCAACTGTCATGTGAAAGAATATTTGGCTTGGAGAGTGAAGTCCTTAAAGCAAAATATGAATTTGAGAAGCTCCATGAGGAAACCATGATGGAAATAGTTAAGTTGTGTAGTGCTGAAGAGCAATGCCGTTCATTGATGAAGGAAAATCAGAATCTCAAATTTGAATTTGAACAAAGCAAAGATGTTTTGGAAGAAGTCAGGGAACTTTCGGTGGAGAAACATGATCTTATGAAGCGAGCAATTAAGGAGAAAGAGGATGCCGATAATGAAACAAAACGTTTTCATAAACAGCTTTCTCTGGTATCAAATGATAACAAGAGTCTCGAGATCCAGGTACTGTCCGTAATGAAACTTTTGGAAAACTCCAGAGCTGAAGTACAAAACATGAGAATTGCAAAGTCTAAATTAGAGTCTGAGAAAGAAGCTGCTATACTGATGGGCCAGCTAGCTTGGAGAAGCCTTTCTAGCTTGGAGACTGACAATTTTGAAGCAAAAGAAGAAATGGGGAAACTTCATGCTGAAATTTTGTTGGGCATCATTATGTTGTGTTCTGCAGAAGAGAAACATTTTGCATTGGAGACATCAAATGAAAGACTAAAATTAGAGCATGAAGTAAGGAAAAGAGTGCTGGAAGAAATCCAGATGTTATCAGTAGAAAGCCAACATCTTTTGGAGCAAGAAGTTAATGAAAAAGTGATCATCAAAAATGAAATAGAATTTCTTCAAGTAGAAGTTTCACAGCTTACAGTTGATAACCAGAATATGAAGAGTCAGATAGCATCCATGTCCAAGCATTTGGATGCATACAGAGCTGAAGTTCAACATTTGAGTAATGCTGTGTCCATATTAGAAGGTGAGAAGGAAGATACTCTTTTCAAGAACCAGCTCTCCGCGGAGAGTCTAACTAGTTTGGAGGGCGAAGTATTCACAGCAAATGAAGAAATCTTGAAACTTCATGAGGAAGTTTTGATTGGCATAGTTAAATTGTGTAGTATAGAAGAGCAATATCTTTCATTGAGGAGTACAAGACACTGTTTAAATTTAGAAATTGAAGAACAGAAAACTATGCTGGAAGACCTCATAATTTCCTTGCAAGAGAGTGATAAGCAGCTGGTGGAGGCTAAAAAATCTTTTCAATCCTTGGAGAGGCAATATAGCCTGTCTCAAGAAAACGTTAGGCATATGAATTTAGAATTCCAAACTCAACTTGAGAAGTTTCAGGACATTGAACATAGTAAAATAGGCTTAGAGGAAAAAGTGCACCAACTTGAAGATATAAATTATAGCCTCAATGAGCACATAATCATATATGATTCAAAGCTTAAACTTCTGCAAGATGAGATTGTCTTTTTGAAGGAAACTAATAATAAAGTTGAGGATGAGATCAAAATCAATTTAGTGAACAACAGACTTCTTCAACAAGAACTTGATTCTGTTAAGGATGATAGATATGAGTTAAACTTAAAGCATAAAAGCCTAATTGAGCAGATGGAAGTAGCCAGTTTAAACATGGAATCCCTTGAAATACTGATCAAGGAGCTGCAATTTGGGTGTACCGAACTGAAGGATGGTTGCAAGAAGCTTGAGGATGAAAAGCTGGTGTTTTTCAATAAACTGCAGGATATGGAGGCAATTTCTGAAAGGAATGCAGTTCTGCAAAATGCATTGTCTGATGCAGTGGATAAGATTAGAGCTCTAGAAAATTCTTGCGAGTCTCTCACTGCTAAAGATTCCACCCATGCTGTAGAAATGGCTGCTTCACTCTCCCAAATGAAGGCTATTTTTGACAATCTGCAAAGGCTTTCAGATAAGAATTCAATCCTGGAGAACTTTCTAGCTGATGCGAATACGGAGCTTGAAGGCTTACGATTAAAATTAAATGAATCTGAAGAATCCAATCAATTTCTCTCTAATCAGAATTCAAACCTTCTTCTCCAAAGAAATGCCCTAATTTCCCAGGTAGAAAGCTTTCATTGTAGTCTGAAAAATTTAGAGACAAAATATGCAATGCTGGATACAAGTTACTTAAATTTAAAGGAGGAAAAGGACATTTTGGTTGCCCAAGTCATGGAGCTCGATGATGCGTTGAAATTTCAAAAAAAAGATCAAGAGTCTCTTATTCAATCAAGCAAATTGTGCCTTTTCTCTCTAGAAAACCAAATCCATCTTCTTCAAGAAGATGGAAGATTCAAGGAGGAGGAGTTGGACACGGCACACCAAGAAATCATGAGTAATATGATCGAGATTCTTGTCTTGCAGAGATGCCTTTGTGATATGAAAGATTCATTCAATGCTGAAAAGCTGAAACATGAATGCTTAATCCAGTCAAGTAATATTCATTTATCATCGTTGGAAAATCAAATCAATCTTATGCAAGAAAAAGGACGGGTTAGAGATGAAAAATTAGAGGAACAACAGCATAAATACTTAAGTGCCAAACTTGAAATATTTATCTTGCAGAAGTGTTTGTCTGAAATGGAAAAGAAGAATTTTGTTCGGTTTCAGGAGTGTCAGAAGCTTGCTGAGGCCTCTAGATGTGCAGGTGAACTAATCTGCCAGCTGGAAGCCAGTAAACTCCTGCTTGAGGAAGAAAGTACTCTGTTGTTGGATCATAAAGCAAAGGTGAAAGATGGGATTGATCTTTTGCTGGAGTCACTTGATATCAATAAGAAGATGAATATTGATGGAAGTGAAGATGCTTTTCTACAGATCATTTTGCGGGATGTTAAAAATTTGTTGGCTTGCATTTCAGATGCCAATGAATATAATCTACTTCTTCATATAGAACTTTCTGTTTACCTCATCTTCTTAAAACAAAATACCCTGGAAAAAGTTTTGCTTGGCCAGGAACTTGAAAGAACGGAAGGCAAGCTGCTCTTTTTTCAGAGAGACCGAGATCAACTCTTTGAAGGATGCGAAAAACTCTGTCAAGAAATCGATGATAAAGACCACACTAACAAGTTGTTAGAGATCGAGCTGGATTCACTTCGTAGACTGTTGTCAAGCTTGTTGAAGGAATTTTCTAATTTGAAGGATGAAAAGAGTGCTTTGGAAGATGAAAATAATGCACTACTTAACGAGGCTATGAATTTGGAGCACCTCTGCTTATTTTACAGGAGTGCAAATGCTGAAATCTTCCAGCATTTTGAAGAGGAAAACAATGTAATTATTGGCTCTCTTGTTGCAACTAAGAATGCACATATGAGTTATATCAAAAAAAGTGAAGAGAAGTTGAAAGCTGTGGAAGATGAAAACAAGAGTCTTAAGAACTTGCATGTATTATGGGAAGACTTAAGAGGTCGAACAACATTGCTTGAGTTTGATCTGGTCACAACCAAAAATTTCTGTGAAGAACAAATCTTTCAAATTGAAGTTGGGAAGAATCTTTTGAGGAAGAAAAGCATGGAACTTGATGCTGCAAATCACGAAGTAGACAAGACTAACATAGCAAAAATGCAATTTGAGGAAAAAATATCTGTACTATTGGAAGGTCATGCCTGTAAAGATGCCCAGATTATTAACATTTATGAAGAAAATCGAATGCTTAATGTGGAACTAAACAGATTCAATGGTATGATTGAAGTGCTTGGTGAGAGGGAACATAATCTGTCTTCCGAGCTTCAGAAGAAAATATGTGAAGCTGATGAGTACGAGGAAGAAATTACAAATTTATTGAATGGTATCCAAGTTTCTGTGGTCATTGGTATGATACTTGAAGATAAGATGCTTGAGTGGGCCATCACATATGAAAGGCTTCGGATTTGTTCTTTGGTACAATGGGAAATGCTCATTAAAGAGATCACACTGAGGAATTCACATGAATTCATTTTGCAGAAGAAGCTTCATGATCTTGAAAAGGAAAATACAGAGCTTAAAGCCAAATGGAATTCCTGCTTACCCCTGTTTTCTTCTCTGGAAAATGGTATTGCTACTGTGGATAATCAAGTTCATCAACTTGCTTATCTTCAAAATTACCAGGTTATTTCTTTAGCTGATCGTCTGGAGGATAAGAGCAACAACCAAACAAACAAGGGTGATCTTGGCACCATTTCTGGAGCCATGGAGCTGCAGAACTTGCTTTCTAAACTGGAAGCTATTGAGAAGTTGCTGCTGCATACCAATAATCAGCTAAAACAGGAAAAACATCTGCAAGCTTTTGAAAACTTAGAGCCTTTAAAAAGAGGAATTGAGGGGTTAAAGCTGGAAACCTCTGATCGACAGGCAGCACAAAGTGAGGAACCCTCTATAGTGAAGAATGGGCAGCTGATGAAAGACATTGAGCTCGATCAAATATCGAGCTCTAACATTGTTAGCAGAATCCAGAGTGCTGAGTCAGAGGACCAGATGCTTAAACTATGGGAAACTGCCGAGAAAGACTGCAGCACAGAGCGAGCTCATGACTTCAAAATCGGAATCGACTCTGAGAAAGAGGTTGGTGTCGACAAGCAGGAGATATCAGTGGAGATTAAAGAGTCCCGAGAAGAGTGGAGCAAAGAGGTCATTGAAGGGCTTTCTGCAGGTGCCGAGAGGCTTTCTGTCCTCAAGGTGACTTGCCTGAAACTCAGCCTAAAGGTTGACAGATTTGGCAAAAGCAAGCGGCTGAAATGTTCAGAGCCTATTACAATACAAACCAAGCTGAAGCAAGCAAAGGAAGAAATCTTATCGCTGGCCGATATCGTCTCCAAGTTGAGGAAGAGGGTGGAAGAGTATTTGAAGCCGTTTGAAAAGATGGCCAGGTTAGACAGGGAACAAGTGTGGGAGCAGATGGTAATGATTTTAGATCGGATTGAGAAGTTAGAGAAGGAGATGGCAGAGATGAAGTTACAGGGTGCTCGTACATTTCGAGTGCTGCTTTGGGACTATATCTTAGGATGGAGAGTTAAGCAGGGGAGGAAGAAGAGAGGCCACCTTTGTGGCTGTATCAGGCCAAAGACTCAAGAATAATGATAACTAGTTAAGAAATCTCTTTAGGATGTTTGGAGTAAATGAGGCTAAGTTGTAGGCATGCAGCAATTGTACATTTTAAGCTTAGGCTAATTTGGTGGGTGATTTAGTCAGTTACTATACCCCTTTTATCGAACTATGATTTCTTTTATGAGTTAGCCGAACAACTTCTACAATGAAATTTTTCTAACATCAAATTGATTTATAATTTCAATTTTTTGTTATTGTTTTAGTCTAAGATGCTGCTCTTTATAAAAGAGATTTTTAAAATTTGAATGGGAAAAGTTGG

Network for GWHGAAEX012150

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07765.11	KIP1	14	87	9.90E-36

Protein Sequence

>GWHPAAEX012150
MSTFMHAEPRRSYSWWWGSHISPKNSKWLQENLTDMDLKVKAMIKLIEEDADSFARRAEMFYKKRPELIKYVEDIYRAYRALSERYDHATGALRHAHRTIAETFPNHIPLALPDESPSISPSTEMVLCTPETPSSLHLFNPDDLQKGALGGPEYFHIDNENVPYADQNDLFEAKKGLKQLKELFAPRELTNRVKFHEGKARKGLIFQEEEECVSESQLSIQEKENANIEIERLQEEVSLLSIENQKLKIQIKSQSMSLDSSRTESQMLRDAITKLESEMDAAFLKNQLSCERIFGLESEVLKAKYEFEKLHEETMMEIVKLCSAEEQCRSLMKENQNLKFEFEQSKDVLEEVRELSVEKHDLMKRAIKEKEDADNETKRFHKQLSLVSNDNKSLEIQVLSVMKLLENSRAEVQNMRIAKSKLESEKEAAILMGQLAWRSLSSLETDNFEAKEEMGKLHAEILLGIIMLCSAEEKHFALETSNERLKLEHEVRKRVLEEIQMLSVESQHLLEQEVNEKVIIKNEIEFLQVEVSQLTVDNQNMKSQIASMSKHLDAYRAEVQHLSNAVSILEGEKEDTLFKNQLSAESLTSLEGEVFTANEEILKLHEEVLIGIVKLCSIEEQYLSLRSTRHCLNLEIEEQKTMLEDLIISLQESDKQLVEAKKSFQSLERQYSLSQENVRHMNLEFQTQLEKFQDIEHSKIGLEEKVHQLEDINYSLNEHIIIYDSKLKLLQDEIVFLKETNNKVEDEIKINLVNNRLLQQELDSVKDDRYELNLKHKSLIEQMEVASLNMESLEILIKELQFGCTELKDGCKKLEDEKLVFFNKLQDMEAISERNAVLQNALSDAVDKIRALENSCESLTAKDSTHAVEMAASLSQMKAIFDNLQRLSDKNSILENFLADANTELEGLRLKLNESEESNQFLSNQNSNLLLQRNALISQVESFHCSLKNLETKYAMLDTSYLNLKEEKDILVAQVMELDDALKFQKKDQESLIQSSKLCLFSLENQIHLLQEDGRFKEEELDTAHQEIMSNMIEILVLQRCLCDMKDSFNAEKLKHECLIQSSNIHLSSLENQINLMQEKGRVRDEKLEEQQHKYLSAKLEIFILQKCLSEMEKKNFVRFQECQKLAEASRCAGELICQLEASKLLLEEESTLLLDHKAKVKDGIDLLLESLDINKKMNIDGSEDAFLQIILRDVKNLLACISDANEYNLLLHIELSVYLIFLKQNTLEKVLLGQELERTEGKLLFFQRDRDQLFEGCEKLCQEIDDKDHTNKLLEIELDSLRRLLSSLLKEFSNLKDEKSALEDENNALLNEAMNLEHLCLFYRSANAEIFQHFEEENNVIIGSLVATKNAHMSYIKKSEEKLKAVEDENKSLKNLHVLWEDLRGRTTLLEFDLVTTKNFCEEQIFQIEVGKNLLRKKSMELDAANHEVDKTNIAKMQFEEKISVLLEGHACKDAQIINIYEENRMLNVELNRFNGMIEVLGEREHNLSSELQKKICEADEYEEEITNLLNGIQVSVVIGMILEDKMLEWAITYERLRICSLVQWEMLIKEITLRNSHEFILQKKLHDLEKENTELKAKWNSCLPLFSSLENGIATVDNQVHQLAYLQNYQVISLADRLEDKSNNQTNKGDLGTISGAMELQNLLSKLEAIEKLLLHTNNQLKQEKHLQAFENLEPLKRGIEGLKLETSDRQAAQSEEPSIVKNGQLMKDIELDQISSSNIVSRIQSAESEDQMLKLWETAEKDCSTERAHDFKIGIDSEKEVGVDKQEISVEIKESREEWSKEVIEGLSAGAERLSVLKVTCLKLSLKVDRFGKSKRLKCSEPITIQTKLKQAKEEILSLADIVSKLRKRVEEYLKPFEKMARLDREQVWEQMVMILDRIEKLEKEMAEMKLQGARTFRVLLWDYILGWRVKQGRKKRGHLCGCIRPKTQE

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003779	Molecular Function	actin binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.780
SRP064423	SRR2545915	Juvenile tuber	33.740
SRP108465	SRR5643513	five period of Gastrodia elata	8.420
	SRR5643514	five period of Gastrodia elata	8.410
	SRR5643515	five period of Gastrodia elata	5.790
	SRR5643524	five period of Gastrodia elata	5.640
	SRR5643525	five period of Gastrodia elata	2.370
	SRR5643528	five period of Gastrodia elata	1.940
	SRR5643658	five period of Gastrodia elata	1.900
	SRR5643659	five period of Gastrodia elata	17.590
	SRR5643660	five period of Gastrodia elata	17.800
	SRR5643661	five period of Gastrodia elata	16.300
	SRR5643662	five period of Gastrodia elata	12.930
	SRR5643663	five period of Gastrodia elata	16.060
	SRR5643664	five period of Gastrodia elata	15.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.170
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.950
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.310
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.970
SRP279888	Gastro	Gastrodia elata tuber	15.69
	Juven	Juvenile tuber	13.17
	Mother_Gastro	Mother tuber of Gastrodia elata	0.27
	Mother_Juven	Mother tuber of Juvenile	4.27