Detail information of GWHGAAEX012152/evm.TU.scaffold_41.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108805992|ref|YP_645929.1|1.00E-27protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941]
KOGKOG12398.00E-126Inner membrane protein translocase involved in respiratory chain assembly
nrgi|695047188|ref|XP_009411464.1|0PREDICTED: mitochondrial inner membrane protein OXA1-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SKD3|OXA1L_ARATH2.00E-126Mitochondrial inner membrane protein OXA1-like (Precursor)
trEMBLtr|M0TPP2|M0TPP2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11890_001}
TAIRAT2G464708.00E-126inner membrane protein OXA1-like

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004015172661548831-
Transcript Sequence

Network for GWHGAAEX012152

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02096.1960KD_IMP1623522.20E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03217yidC, spoIIIJ, OXA1, ccfA Protein export map03060
Bacterial secretion systemmap03070
Quorum sensingmap02024

Gene Ontology

GO term OntologyName
GO:0032977Molecular Functionmembrane insertase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.410
SRR2545915Juvenile tuber19.600
SRP108465SRR5643513five period of Gastrodia elata27.430
SRR5643514five period of Gastrodia elata28.700
SRR5643515five period of Gastrodia elata24.720
SRR5643524five period of Gastrodia elata26.490
SRR5643525five period of Gastrodia elata16.270
SRR5643528five period of Gastrodia elata20.280
SRR5643658five period of Gastrodia elata13.810
SRR5643659five period of Gastrodia elata33.090
SRR5643660five period of Gastrodia elata30.240
SRR5643661five period of Gastrodia elata32.230
SRR5643662five period of Gastrodia elata28.410
SRR5643663five period of Gastrodia elata33.200
SRR5643664five period of Gastrodia elata24.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.580
SRR6049655Rhizomagastrodiae_C368-T10_good_145.850
SRR6049656Rhizomagastrodiae_C368-T07_good_132.630
SRR6049657Rhizomagastrodiae_C368-T07_good_120.680
SRR6049658Rhizomagastrodiae_C368-T04_good_120.620
SRR6049659Rhizomagastrodiae_C368-T04_good_118.710
SRR6049660Rhizomagastrodiae_C368-T01_good_126.620
SRR6049661Rhizomagastrodiae_C368-T04_good_120.090
SRR6049662Rhizomagastrodiae_C368-T01_good_136.130
SRR6049663Rhizomagastrodiae_C368-T01_good_132.310
SRR6049664Rhizomagastrodiae_C368-T10_good_144.910
SRR6049665Rhizomagastrodiae_C368-T10_good_144.910
SRP279888GastroGastrodia elata tuber 28.16
JuvenJuvenile tuber25.94
Mother_GastroMother tuber of Gastrodia elata 16.34
Mother_JuvenMother tuber of Juvenile 19.65