Detail information of GWHGAAEX012155/evm.TU.scaffold_41.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672204784|ref|XP_008779007.1|7.91E-151PREDICTED: F-box protein PP2-A13-like [Phoenix dactylifera]
Swissprottr|Q9LEX0|P2A13_ARATH5.00E-115F-box protein PP2-A13
trEMBLtr|M0RWU8|M0RWU8_MUSAM3.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P03900_001}
TAIRAT3G610602.00E-114phloem protein 2-A13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004019812642008121+
Transcript Sequence

Network for GWHGAAEX012155

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14299.5PP21192763.50E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.330
SRR2545915Juvenile tuber9.880
SRP108465SRR5643513five period of Gastrodia elata11.820
SRR5643514five period of Gastrodia elata12.210
SRR5643515five period of Gastrodia elata11.730
SRR5643524five period of Gastrodia elata11.040
SRR5643525five period of Gastrodia elata27.590
SRR5643528five period of Gastrodia elata20.750
SRR5643658five period of Gastrodia elata23.030
SRR5643659five period of Gastrodia elata14.980
SRR5643660five period of Gastrodia elata13.970
SRR5643661five period of Gastrodia elata15.340
SRR5643662five period of Gastrodia elata15.820
SRR5643663five period of Gastrodia elata14.660
SRR5643664five period of Gastrodia elata14.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.280
SRR6049655Rhizomagastrodiae_C368-T10_good_110.270
SRR6049656Rhizomagastrodiae_C368-T07_good_110.240
SRR6049657Rhizomagastrodiae_C368-T07_good_19.130
SRR6049658Rhizomagastrodiae_C368-T04_good_110.520
SRR6049659Rhizomagastrodiae_C368-T04_good_18.620
SRR6049660Rhizomagastrodiae_C368-T01_good_110.370
SRR6049661Rhizomagastrodiae_C368-T04_good_19.880
SRR6049662Rhizomagastrodiae_C368-T01_good_111.800
SRR6049663Rhizomagastrodiae_C368-T01_good_110.120
SRR6049664Rhizomagastrodiae_C368-T10_good_113.970
SRR6049665Rhizomagastrodiae_C368-T10_good_113.970
SRP279888GastroGastrodia elata tuber 13.73
JuvenJuvenile tuber11.01
Mother_GastroMother tuber of Gastrodia elata 7.83
Mother_JuvenMother tuber of Juvenile 7.31