Detail information of GWHGAAEX012159/evm.TU.scaffold_41.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672159520|ref|XP_008799524.1|3.54E-117PREDICTED: protein IQ-DOMAIN 1 [Phoenix dactylifera]
Swissprottr|Q9SF32|IQD1_ARATH2.00E-15Protein IQ-DOMAIN 1
trEMBLtr|M0T038|M0T038_MUSAM6.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P20090_001}
TAIRAT4G230605.00E-39IQ-domain 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004025585172561347-
Transcript Sequence

Network for GWHGAAEX012159

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00612.26IQ851043.00E-07
PF00612.26IQ1101240.23
PF13178.5DUF40052423272.50E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.040
SRR2545915Juvenile tuber37.550
SRP108465SRR5643513five period of Gastrodia elata38.740
SRR5643514five period of Gastrodia elata24.080
SRR5643515five period of Gastrodia elata36.900
SRR5643524five period of Gastrodia elata34.490
SRR5643525five period of Gastrodia elata95.350
SRR5643528five period of Gastrodia elata97.970
SRR5643658five period of Gastrodia elata104.270
SRR5643659five period of Gastrodia elata19.340
SRR5643660five period of Gastrodia elata16.120
SRR5643661five period of Gastrodia elata22.910
SRR5643662five period of Gastrodia elata25.990
SRR5643663five period of Gastrodia elata23.160
SRR5643664five period of Gastrodia elata15.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.310
SRR6049655Rhizomagastrodiae_C368-T10_good_116.780
SRR6049656Rhizomagastrodiae_C368-T07_good_115.020
SRR6049657Rhizomagastrodiae_C368-T07_good_118.430
SRR6049658Rhizomagastrodiae_C368-T04_good_114.740
SRR6049659Rhizomagastrodiae_C368-T04_good_117.690
SRR6049660Rhizomagastrodiae_C368-T01_good_121.650
SRR6049661Rhizomagastrodiae_C368-T04_good_121.010
SRR6049662Rhizomagastrodiae_C368-T01_good_118.690
SRR6049663Rhizomagastrodiae_C368-T01_good_118.400
SRR6049664Rhizomagastrodiae_C368-T10_good_114.970
SRR6049665Rhizomagastrodiae_C368-T10_good_114.970
SRP279888GastroGastrodia elata tuber 22.64
JuvenJuvenile tuber32.80
Mother_GastroMother tuber of Gastrodia elata 89.12
Mother_JuvenMother tuber of Juvenile 62.90