Detail information of GWHGAAEX012161/evm.TU.scaffold_41.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|6.00E-41hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01921.00E-163Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|672159618|ref|XP_008799574.1|0PREDICTED: probable serine/threonine-protein kinase roco5 [Phoenix dactylifera]
Swissprottr|Q05609|CTR1_ARATH3.00E-97Serine/threonine-protein kinase CTR1
trEMBLtr|V7CNG2|V7CNG2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW30461.1}
TAIRAT4G230501.00E-163PAS domain-containing protein tyrosine kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004029260212936246-
Transcript Sequence

Network for GWHGAAEX012161

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13426.6PAS_9851781.50E-08
PF07714.16Pkinase_Tyr4036538.10E-62
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL_CTR1-DRK-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.150
SRR2545915Juvenile tuber22.250
SRP108465SRR5643513five period of Gastrodia elata18.260
SRR5643514five period of Gastrodia elata17.460
SRR5643515five period of Gastrodia elata15.560
SRR5643524five period of Gastrodia elata17.400
SRR5643525five period of Gastrodia elata22.440
SRR5643528five period of Gastrodia elata20.120
SRR5643658five period of Gastrodia elata18.980
SRR5643659five period of Gastrodia elata22.420
SRR5643660five period of Gastrodia elata22.720
SRR5643661five period of Gastrodia elata22.580
SRR5643662five period of Gastrodia elata20.170
SRR5643663five period of Gastrodia elata22.300
SRR5643664five period of Gastrodia elata22.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.300
SRR6049655Rhizomagastrodiae_C368-T10_good_120.370
SRR6049656Rhizomagastrodiae_C368-T07_good_123.250
SRR6049657Rhizomagastrodiae_C368-T07_good_126.320
SRR6049658Rhizomagastrodiae_C368-T04_good_130.820
SRR6049659Rhizomagastrodiae_C368-T04_good_136.560
SRR6049660Rhizomagastrodiae_C368-T01_good_126.780
SRR6049661Rhizomagastrodiae_C368-T04_good_129.530
SRR6049662Rhizomagastrodiae_C368-T01_good_124.070
SRR6049663Rhizomagastrodiae_C368-T01_good_129.030
SRR6049664Rhizomagastrodiae_C368-T10_good_119.670
SRR6049665Rhizomagastrodiae_C368-T10_good_119.670
SRP279888GastroGastrodia elata tuber 27.01
JuvenJuvenile tuber27.50
Mother_GastroMother tuber of Gastrodia elata 30.97
Mother_JuvenMother tuber of Juvenile 30.91