Gene detail

Detail information of GWHGAAEX012165/evm.TU.scaffold_41.48

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0565	Inositol polyphosphate 5-phosphatase and related proteins
nr	gi\|672169840\|ref\|XP_008804965.1\|	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Phoenix dactylifera]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|F6HI59\|F6HI59_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB51905.1}
TAIR	AT3G63240	DNAse I-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000040	3419664	3426282	+

Transcript Sequence
>GWHTAAEX012165 TCAAAGACTAAAATTTCAGAGAAAGAGAAAGGGTGCTAGAGAAAGAAAGGTTGCAAAGTTGAGGTGAGAGAGAGAAAGATTGCGACTGTGAGGGCAGAGGAGCCGAATTGCAAACGCTTTATTCTCTTCAAAGACTAAAATTTGAAGGAGAGAGTTCTCCCACCCATTCGCACACTTGAACACTATATCTCATTGCCTTCTTTTCGCTATTCAATGAATCAATCCTCGCTTCATTATCCCAAACTAGTTTCTCCTCCGAGTTGCTTCAATTCCTAAGCTCTGAAATCGAGAAACATCTCCATTAAAGACATCAAAGTGTCTCATTGCCTCTTTATCAAAGGGAACCGGAGAAGAATCTTGTTTGGCTTCAAATCATATTAGTCTGCAAGAGTAAAAATTCTTCCTTTGGCCTCCTTTTTCTTCTCATGCCCCTCCTACTCAAATGAGAATGCCTCTTCCATTGCAATCCGAGTAGACCGAAAGGGATTGGAGCCTCTTCTCAGGAGACAATGAGAGATGGGAATTCAACGAAAAGCAAGCTTTCATGGTCCAAGTCTCTTCTTCGCAAATGGTTCAATCTTAAGGGTAAAGCTCAGGACTTTCATGCTGATGATGTTGTGAGGAGAGGAGGCAGGGAAGAATGGAGGAACAGTTCATCTACTGTGAGAAGAAGTAGAACAGAGAGACCGTCCAACAAGATGAATCCGGATAGATTCCAGCGAGGAAAAATCGACTGCGACGCATCCCAAGTCACAGAAACTCAAGAATACAGGATCTTTGCTGCGACATGGAATGTTGGCGGTAGATCGCCGCCCAGCTCTTTGAGCCTCGAGGATTGGCTCCATGTCTCTCCGCCCGCAGATCTGTACGTGTTAGGGTTTCAAGAAATAGTCCCGCTTAATGCTGGGAACGTTCTTGGAGCGGAGGACAACGGCCCGGCGAAGAAATGGGTTGCCCTAGTTCGAAGAACGCTGAATAATCTTCCGGGAACGGGTGGAAGCAATCAGACGCCTTCTCCAGTTCCGGATCCAGTTGCGGAGCTCGATGACGATTTCGAGGGCTCGTCTCAGAGGAATTCTTCTTTTTTGCAGCGCCGGTCATTCCAGGCGCTCAGCCGCAGCCTGAGAATGGACGGCGAAATGCTTGCCGCGCAGCCGAGGCTGGAACGGCGGTACAGTGTCTGTGAGCGATCGATGTTTGGAAGCAGGACGAGCGATTTTGATCCCATTTTCAGGTGGGCCGGCGGCTCTTCGGACGACGACTGTGCGGCCGGCGATTCCCCCAATGCTGCTTACTTCTCTCCATCTTTACATGCCTTCGGCGCTTCTTCTTCCTATGCTGATCATAGGGATGCGTCTGTGGGATTGCCAAGGTATTGTTTGGTTGCAAGCAAGCAAATGGTTGGGATTCTTCTCATGGTGTGGATTAGAAGCGAAAATCGAGATGATGTCAAGAACATCAAGGTTTCCTGTGTTGGGCGAGGATTAATGGGGTATCTTGGAAATAAGGGTTCGATTGCAATTAGCATGTCTTGGCACCAAACAAGCTTCTGCTTCGTCAGCAGCCATTTGACATCAGGACAGAAGGATGGCGATGAACTGCGGAGGAATTCAGATGTGATGGAGATTACTAGGAAGACTAGATTTCCAAGGGTCAATAGAATTGGAGATGAGAAATCCCCTGAAACGATCCTTGAACATGACCGGATAATATGGCTTGGAGATCTGAACTACCGGATTGCTCTCTCTTATCGATCAACAAAGGCTCTTGTGGAGATGCACAATTGGAAAGCATTGCTGGAGAAAGATCAGCTTCAAATAGAGCAAAGATGTGGCCGTGTTTTCGAGGGTTGGAACGAAGGAAGGATTTACTTCCCGCCCACTTATAAATACTCGAACAACTCAGACCGATATACGGGCGACGAGTTGCATTCCAAAGAGAAACGCCGCACACCCGCATGGTGTGATCGCATACTATGGTATGGGAGAGGACTAAACCAGTTGTCATACGTGAGGGGAGAGTCGAAGTTGTCTGATCATAGGCCAGTGTTGAGCATCTTTGTCGCAGAAGTTGAATCCATCAATCACAATAGAATCAAGAATATGAGCTTCCCGAGCGCACGGGTTGAAATTGAGGAACTTCTCCCATACTCAAATGGATATGCAGAGCTTGGTTTTCTATGAAAGGTGAAAGAAGTTCAGTCTGAAAGGTGCAAAGAGTGGGTGCAGCCAACGGCTCCCTTTCCTAAAATAGGAAGATGCCGCAAGAACATAAAACAAAAGACAGGAAAAGTCAAGGCAAACAATTCCAACTACATTACTAAATAGGTGATCGTAGTGATTGTAGCGCCCTTAAGCAGGTTTTTGAATTTCTTATGATGTTTCTCACTTTTCTTGGCTTGGTGGCAGGTATACAAAGGGAAAATTTTGGCCATTATATCTTGAATCAAATTTGATCGAGCTGGTGCAGTTGCTTCGAGATTCCTGAAATGATATTATAATTAATCAATAGCATATTGCTTGAATCTTTGAGCAAATTCCTGAGCTTCCCATGCCAGTATGATCAAGGTTGGTTCATACTATTTTGATTTTTTTTGGGAACGAGCCTTACAGTCGTGCACTGTGCGAGAGAAATAAAGCAGGCTTCCACTAATAAATGATCTAAAGAGTGGTTAATTAACAGTGACTTCCACCGGGCAAAAATTAATCAAATATCCTCATTTCAAGTCTCACCATAAAAAATTATAATTGAAATTTTAATGATTGCTTGATCCCAACCCCCACTTCTCCCATAAAATGAAAGGATTTATTTGGTGTATGTGTTGGTAATCTTATGATTAAACTTTCAAATAATTTTTCTTAATGATAGCAGAAGGTACTGATATTAAATTCTTCGTTTTTTTTTTCCTTATTTCAGATTCCATTCTATCTGTTCATAGTGTGATTTTTTTATTGTTCTTTCCTTCAAGTTGAAAGTGTGTCTGCTATGTGATGTTGGATGCTAATGATTGTGCATAATTCTTTGTATAATTTGGAAAAGGTTCGTAGGAAGAAGATAAAGGAGCTGATAGCAATTATGCTGTATTGGTTATTCAGATAATGGAATAGTGTTTTTGCTGAAAAAGTCATTTCTGTCAGTTGTGTTTTGTTTTATTTTTTCAAAGGCTGTTTTTGTTCCATTGCTTTCCCTCTTTTATTTTCAAGTGTGATCTGAGAAAGAATAAGAAGGCAGATCTTGCAGGGTTAATAAGAACAAGGACACATGGAATTAAAACAAAGGACAAATTATCTGTACAAAAAAATAGAAAGTGAAAAAAAATGATGTCAAGAAAGAGAAAAAAGGCTGCTCTACCTACACTTTAGGCAGCAGTTGTAACTTGTAAGGCAAAAGAACATATTAGAAGATTGCTGTGACATCAGGCCATCCTGACAATTGAATGTAAATAAAAAGCATAAGATGCTTTGGTGCTCCAACTGTTTTTTGTAGTCAATTAAATGTCTTTAATCTAATTACCATTATAATTTTGACAAATAAATCTTAATTATTATAGTTTAACAATAGGTTTATAGTTCTTAACAAGCGGAGTAATATAGAAGCAGTCAAATAAAAATTTTAGTTCATTAAATGTCATTTGGACATGCATTTTTGTCTTATTTTATATGTTGTAATTTTGAACTGATTTTTGAGCTTGGTAATACTCTGTTGTTGAGCTTTAATTTGACACTTTTCCTAGAAATTATGAATAGTTGGGTTGTGTGAATCATGAGTTCGGGCTACAAATGAAAAGTAGCCACCTTACTG

Network for GWHGAAEX012165

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03372.22	Exo_endo_phos	92	510	3.70E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.970
SRP064423	SRR2545915	Juvenile tuber	3.270
SRP108465	SRR5643513	five period of Gastrodia elata	4.970
	SRR5643514	five period of Gastrodia elata	4.360
	SRR5643515	five period of Gastrodia elata	4.710
	SRR5643524	five period of Gastrodia elata	4.950
	SRR5643525	five period of Gastrodia elata	11.920
	SRR5643528	five period of Gastrodia elata	9.560
	SRR5643658	five period of Gastrodia elata	14.830
	SRR5643659	five period of Gastrodia elata	3.020
	SRR5643660	five period of Gastrodia elata	1.810
	SRR5643661	five period of Gastrodia elata	2.580
	SRR5643662	five period of Gastrodia elata	2.310
	SRR5643663	five period of Gastrodia elata	2.840
	SRR5643664	five period of Gastrodia elata	2.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.820
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.020
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.390
SRP279888	Gastro	Gastrodia elata tuber	1.96
	Juven	Juvenile tuber	2.98
	Mother_Gastro	Mother tuber of Gastrodia elata	10.48
	Mother_Juven	Mother tuber of Juvenile	11.25