Detail information of GWHGAAEX012175/evm.TU.scaffold_41.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34672.00E-66Histone H4
nrgi|195617694|gb|ACG30677.1|8.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)
TAIRAT5G599702.00E-66Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004041852664186085-
Transcript Sequence

Network for GWHGAAEX012175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15511.5CENP-T_C35961.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms77.480
SRR2545915Juvenile tuber86.150
SRP108465SRR5643513five period of Gastrodia elata227.220
SRR5643514five period of Gastrodia elata342.080
SRR5643515five period of Gastrodia elata192.490
SRR5643524five period of Gastrodia elata268.910
SRR5643525five period of Gastrodia elata57.900
SRR5643528five period of Gastrodia elata39.280
SRR5643658five period of Gastrodia elata31.840
SRR5643659five period of Gastrodia elata72.930
SRR5643660five period of Gastrodia elata71.460
SRR5643661five period of Gastrodia elata78.800
SRR5643662five period of Gastrodia elata60.320
SRR5643663five period of Gastrodia elata55.680
SRR5643664five period of Gastrodia elata41.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1138.890
SRR6049655Rhizomagastrodiae_C368-T10_good_1138.280
SRR6049656Rhizomagastrodiae_C368-T07_good_1209.730
SRR6049657Rhizomagastrodiae_C368-T07_good_1149.140
SRR6049658Rhizomagastrodiae_C368-T04_good_1127.990
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1149.210
SRR6049661Rhizomagastrodiae_C368-T04_good_1155.460
SRR6049662Rhizomagastrodiae_C368-T01_good_1253.340
SRR6049663Rhizomagastrodiae_C368-T01_good_1162.660
SRR6049664Rhizomagastrodiae_C368-T10_good_1252.860
SRR6049665Rhizomagastrodiae_C368-T10_good_1252.860
SRP279888GastroGastrodia elata tuber 56.45
JuvenJuvenile tuber134.43
Mother_GastroMother tuber of Gastrodia elata 316.46
Mother_JuvenMother tuber of Juvenile 112.66