Detail information of GWHGAAEX012182/evm.TU.scaffold_41.75
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|296133747|ref|YP_003640994.1| | 6.00E-76 | adenylylsulfate kinase [Thermincola potens JR] |
| KOG | KOG0635 | 2.00E-109 | Adenosine 5'-phosphosulfate kinase |
| nr | gi|672177487|ref|XP_008808841.1| | 7.72E-119 | PREDICTED: adenylyl-sulfate kinase 3-like [Phoenix dactylifera] |
| Swissprot | tr|Q9SRW7|APK3_ARATH | 6.00E-110 | Adenylyl-sulfate kinase 3 |
| trEMBL | tr|B4F9S5|B4F9S5_MAIZE | 1.00E-117 | Adenylyl-sulfate kinase {ECO:0000256|RuleBase:RU004347} |
| TAIR | AT3G03900 | 2.00E-109 | adenosine-5'-phosphosulfate (APS) kinase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000040 | 4412667 | 4422224 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012182
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01583.19 | APS_kinase | 137 | 287 | 5.90E-69 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00860 | cysC | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Sulfur metabolism | map00920 | ||
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0000103 | Biological Process | sulfate assimilation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004020 | Molecular Function | adenylylsulfate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.090 |
| SRR2545915 | Juvenile tuber | 16.300 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.490 |
| SRR5643514 | five period of Gastrodia elata | 20.080 | |
| SRR5643515 | five period of Gastrodia elata | 22.890 | |
| SRR5643524 | five period of Gastrodia elata | 23.540 | |
| SRR5643525 | five period of Gastrodia elata | 21.730 | |
| SRR5643528 | five period of Gastrodia elata | 23.920 | |
| SRR5643658 | five period of Gastrodia elata | 20.800 | |
| SRR5643659 | five period of Gastrodia elata | 18.670 | |
| SRR5643660 | five period of Gastrodia elata | 20.800 | |
| SRR5643661 | five period of Gastrodia elata | 18.130 | |
| SRR5643662 | five period of Gastrodia elata | 18.800 | |
| SRR5643663 | five period of Gastrodia elata | 19.000 | |
| SRR5643664 | five period of Gastrodia elata | 14.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.540 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.700 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.560 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.590 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 32.800 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 32.800 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.51 |
| Juven | Juvenile tuber | 36.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.22 | |
| Mother_Juven | Mother tuber of Juvenile | 28.69 |