Detail information of GWHGAAEX012184/evm.TU.scaffold_41.78
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0748 | 3.00E-87 | Predicted membrane proteins, contain hemolysin III domain |
| nr | gi|743860924|ref|XP_010943141.1| | 2.59E-125 | PREDICTED: heptahelical transmembrane protein 4-like [Elaeis guineensis] |
| Swissprot | tr|Q93ZH9|HHP1_ARATH | 8.00E-88 | Heptahelical transmembrane protein 1 |
| trEMBL | tr|A0A096THZ2|A0A096THZ2_MAIZE | 2.00E-120 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G380789_P01} |
| TAIR | AT5G20270 | 3.00E-87 | heptahelical transmembrane protein1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000040 | 4483724 | 4485902 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012184
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03006.19 | HlyIII | 91 | 314 | 1.40E-61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07297 | ADIPOR | AMPK signaling pathway | map04152 |
| Adipocytokine signaling pathway | map04920 | ||
| Longevity regulating pathway | map04211 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.680 |
| SRR2545915 | Juvenile tuber | 3.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.530 |
| SRR5643514 | five period of Gastrodia elata | 6.460 | |
| SRR5643515 | five period of Gastrodia elata | 24.330 | |
| SRR5643524 | five period of Gastrodia elata | 8.130 | |
| SRR5643525 | five period of Gastrodia elata | 4.670 | |
| SRR5643528 | five period of Gastrodia elata | 5.290 | |
| SRR5643658 | five period of Gastrodia elata | 1.340 | |
| SRR5643659 | five period of Gastrodia elata | 16.120 | |
| SRR5643660 | five period of Gastrodia elata | 1.900 | |
| SRR5643661 | five period of Gastrodia elata | 6.130 | |
| SRR5643662 | five period of Gastrodia elata | 16.520 | |
| SRR5643663 | five period of Gastrodia elata | 9.430 | |
| SRR5643664 | five period of Gastrodia elata | 11.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.230 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 41.480 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.150 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.480 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.350 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 28.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 36.450 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 36.450 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.21 |
| Juven | Juvenile tuber | 1.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.71 | |
| Mother_Juven | Mother tuber of Juvenile | 6.80 |