Gene detail

Detail information of GWHGAAEX012191/evm.TU.scaffold_41.85

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695018869\|ref\|XP_009396411.1\|	0	PREDICTED: QWRF motif-containing protein 2-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q94AI1\|QWRF2_ARATH	8.00E-101	QWRF motif-containing protein 2
trEMBL	tr\|M0TKW3\|M0TKW3_MUSAM	2.00E-146	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P26270_001}
TAIR	AT1G49890	1.00E-92	Family of unknown function (DUF566)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000040	4789571	4824210	-

Transcript Sequence
>GWHTAAEX012191 GTCGGTCCCCAACCTGACCCACTCGGACATATCATCTATAGTGTGCAACTAACCCATCTCCCGGACCTTTACATTGCTGCCCAACTTTTTATATTTAATTTAAGAGTTAAGCCTTTTAAATTCATAATTTATTATAATTTTATATTATTTTCGAGCCACGTCCGCCTCTTGCTTTCGCCGGTACGGCAGTTCCCTCCACCTCTCCCTCTCTCTCTTCTCTCCACTTCTTTTTCTCTCTCTAACACCCCAATCTTTGCAAAGCAGCAAAGCTTCGGACTCTCAACTCCGAACTCCGCTTAATAACAACAGCCCACCAGCGCACGGGAAACAAAAACCCTGCTGCTGCCTTCTCTTTCCTCTTATCTGGCTCCTCTTGCTTTAAAGGCAGCGGCGCCGCACGAAGCCAGTGAAAGGAGAAGAAGCTTCAGCGATCTGTTCTCCTTACTTCCTGCAAGTTCGACGAAATCAAGACAAGACGCCGTGAAAGAGCTGAGATCGTACCGGAGGCCATGGTGGCTTCGGCCTCCGATGCCTCCGCCCCCCGAAAAAACCCTTCAGCCATCTATCGACCGAACGATCCGCAGCCGCATCCGTCACGCCGACCCTTAATTCCATCCGAAAGAGGCAATGCAGCCGTTTCTCGGCGACCCCGGACCAAGGAGGTCACATCCAGGTATCTTTCAAATCACTCCTCCTCGTCAACCACATCCACTTCCTATTCCTCAAACACCACTATCTCCTCCTCTTCCTCCTCTTCTTCTTCTCGGAGATTTTTTTCCCCTGTTCCGAACTCCCGACCCTCGACTCCGCCTGCGAAGCGATCGCAGTCGGTGGATCGGACTCGCCCCTTGACTCCCCGGCCAGATCCCCGGGCTGGTGGCGGCGCCGAGGGATCCAACGCTGCTAGGGCGCTTTGCACCACCACTCGGAGTCTCTCTGTCTCCTTCCAAGGTGAATCGTTCTTCTATCAGACCAGCAAGGCGAAGTCACCGTCCCCAGTCCCCTCTCGAAAGCCAACGCCAGAACGCAGGCGTCCCAGCACGCCTTCAAAAACCTCCACCACTGGTGCGTCGCAGCAGTTGGAGAGCTCGAAGCCCTCGGACTTCCACCACCGTTGGCCGGCGGCAAGGAGCCGGCAATCTAGTTTTCCTGCCAAAAGCCTAGAGGGCACGGAGAAGGATGATTTTCTTGCGGCAGTCCAGTTGCTAAGGCAGTCAATGCTATTAGACAATGGTACAAGCAGGGCTTCTTTTGATGGGGATGAACTGTCAGCCTATTCTGATATTGACAGTGTTTCATCTGGAAGCAATTCCGGGACTCCTGAGATCAATGCACGTCGGCAGGCTCAGATCCCTTCCAGAAGCATTATTTTACCGACCAGATCCTCGCAGGAGACAAACTCTAGGCTTCTTCGCCAGTTATCGGATTTTGGGACGCCACTATCTTTATCAGCCTTAAGGAACTCAGCTATGCCAAAATTACCTTCTGTGAGGCGAACATTGGTTGACACCCCTTCCTTGTCTCAGCGATCTGTTTCTTCTCTACTCAAGGGACCAGTGAGACCTTCCAGTCCAAGTAAACTTCTAGGTTCTCCATCCAGGACAATGGCTAGCCCTTTGCGGGCTAGAGGTACTGGTACATTGGCGAGTTCCTTGCCAGCAAATTTACCAGACAATGCACCAAATTTACCAGCCAATGCACCTTCAATTTTAAGCTTCGCTGCAGAGGTGAGGAGAAGTAGGAAAGGCGAGAATCGAATTGAAGAGGCTCATTTGTTGAGACTGTTGCACAACAGACACTTGCAATGGAGGTGTGTAAATGCAAGAATCAACACTTTTATGATGGTTCATAGAATGAATGTAGAGAAGAATCTATATAGCGAATGTATAACAACATCAGAGGTGCGCGACTCGGTTACTATAAAAAAGATCAAGCTTCAATTCCTATCACAAAATTTAAAGCTTGCTTTGATTCTTAAAGACCAGATGCTTCTTCTCGAGGACAGTTCTCTTCTGGACAGAGAACTGTCCAGCTCATTGTCAGGAACAACTGAAGCGCTGAAGGCCAGCACTCTGCGCCTTCCAGTTGTGAGCCGAGCAAGGGCAGATTTGAAAGAAGTGAAGGACGCTGTTGGGTCTGCAGTAGATGTGATGCAGGCGATGGGAGCGTCAATGTGCTCCATTTTGTCGAAGGTGGAAGGCACAAAGTCCTGGGTCTTCGAGCTTGCCAGAGTTGCAGCACAGGAACAAGCCTTGCTAAACAAGTCCCGGGATCTTCTGTCGACATTAGCAGCTTTACATGTTAAGCAGTGTAGCCTGCAAGGCCATCTGCTTCAACTAAAACGCAGAGCCACAGCCGGCCAGATGATACTCCAACTGTAAACACACAGCTGATGACTTTTTCTCACAACCCTGATCACAACAACAGCAACTAACACACCCGTTTCGATCTTATTTTTTTTCTGATTGGGAGATTGGTTCCAAAGCTTTTGGTGGCTCGTCGTTTGGTTTTTTGTTTGGTTCGGCTTCTGATCGCATGCGCCCTTCTTTGGGCACCCGTAATTCTTCATGTATTTTATTTTTAATTTTACTTCTTTTGGTATGCAATTACATACGAATGGCCCTCTTTAGAGGATCGTGTATTCTTGTACTCTTATTGGAGCCAAGCCTCGTGTACATATTTTATGGTCTTTTTTTACTCATTTGTAAGGGGGCCATTCGGTTGTCACACAAAAAAAAAGGATCACCTGTTTCTATATTATATTAATGAAGGCCATTTATATTTATATTTTTGGTTTTAAATGCTACCTA

Network for GWHGAAEX012191

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04484.11	QWRF	261	583	2.50E-91

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.980
SRP064423	SRR2545915	Juvenile tuber	7.010
SRP108465	SRR5643513	five period of Gastrodia elata	14.530
	SRR5643514	five period of Gastrodia elata	18.230
	SRR5643515	five period of Gastrodia elata	14.910
	SRR5643524	five period of Gastrodia elata	16.860
	SRR5643525	five period of Gastrodia elata	10.920
	SRR5643528	five period of Gastrodia elata	9.650
	SRR5643658	five period of Gastrodia elata	13.090
	SRR5643659	five period of Gastrodia elata	5.610
	SRR5643660	five period of Gastrodia elata	6.020
	SRR5643661	five period of Gastrodia elata	5.260
	SRR5643662	five period of Gastrodia elata	7.400
	SRR5643663	five period of Gastrodia elata	7.550
	SRR5643664	five period of Gastrodia elata	7.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	25.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	25.580
SRP279888	Gastro	Gastrodia elata tuber	8.56
	Juven	Juvenile tuber	9.12
	Mother_Gastro	Mother tuber of Gastrodia elata	11.59
	Mother_Juven	Mother tuber of Juvenile	11.93