Detail information of GWHGAAEX012194/evm.TU.scaffold_41.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695065045|ref|XP_009421100.1|0PREDICTED: scarecrow-like protein 32 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SN22|SCL32_ARATH4.00E-155Scarecrow-like protein 32
trEMBLtr|M0RHB5|M0RHB5_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P11390_001}
TAIRAT3G499501.00E-154GRAS family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004050123805015641+
Transcript Sequence

Network for GWHGAAEX012194

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS294086.40E-82
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.420
SRR2545915Juvenile tuber1.360
SRP108465SRR5643513five period of Gastrodia elata39.640
SRR5643514five period of Gastrodia elata47.010
SRR5643515five period of Gastrodia elata30.260
SRR5643524five period of Gastrodia elata43.690
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.040
SRR5643658five period of Gastrodia elata0.030
SRR5643659five period of Gastrodia elata2.780
SRR5643660five period of Gastrodia elata2.870
SRR5643661five period of Gastrodia elata3.240
SRR5643662five period of Gastrodia elata4.200
SRR5643663five period of Gastrodia elata1.670
SRR5643664five period of Gastrodia elata4.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.140
SRR6049655Rhizomagastrodiae_C368-T10_good_134.760
SRR6049656Rhizomagastrodiae_C368-T07_good_135.160
SRR6049657Rhizomagastrodiae_C368-T07_good_127.100
SRR6049658Rhizomagastrodiae_C368-T04_good_145.600
SRR6049659Rhizomagastrodiae_C368-T04_good_141.180
SRR6049660Rhizomagastrodiae_C368-T01_good_130.530
SRR6049661Rhizomagastrodiae_C368-T04_good_128.750
SRR6049662Rhizomagastrodiae_C368-T01_good_136.650
SRR6049663Rhizomagastrodiae_C368-T01_good_146.030
SRR6049664Rhizomagastrodiae_C368-T10_good_161.700
SRR6049665Rhizomagastrodiae_C368-T10_good_161.700
SRP279888GastroGastrodia elata tuber 2.12
JuvenJuvenile tuber9.54
Mother_GastroMother tuber of Gastrodia elata 12.74
Mother_JuvenMother tuber of Juvenile 15.84