Detail information of GWHGAAEX012201/evm.TU.scaffold_41.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|720068367|ref|XP_010277087.1| | 3.27E-149 | PREDICTED: peroxidase 51-like [Nelumbo nucifera] |
| Swissprot | tr|Q43873|PER73_ARATH | 6.00E-135 | Peroxidase 73 (Precursor) |
| trEMBL | tr|B9SGY3|B9SGY3_RICCO | 1.00E-146 | Peroxidase 73, putative {ECO:0000313|EMBL:EEF37080.1} |
| TAIR | AT5G67400 | 2.00E-134 | root hair specific 19 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000040 | 5228974 | 5232625 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012201
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 39 | 288 | 5.70E-61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.750 |
| SRR2545915 | Juvenile tuber | 12.610 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 34.020 |
| SRR5643514 | five period of Gastrodia elata | 30.320 | |
| SRR5643515 | five period of Gastrodia elata | 47.370 | |
| SRR5643524 | five period of Gastrodia elata | 46.590 | |
| SRR5643525 | five period of Gastrodia elata | 35.880 | |
| SRR5643528 | five period of Gastrodia elata | 31.610 | |
| SRR5643658 | five period of Gastrodia elata | 45.250 | |
| SRR5643659 | five period of Gastrodia elata | 5.700 | |
| SRR5643660 | five period of Gastrodia elata | 8.020 | |
| SRR5643661 | five period of Gastrodia elata | 9.490 | |
| SRR5643662 | five period of Gastrodia elata | 6.730 | |
| SRR5643663 | five period of Gastrodia elata | 4.510 | |
| SRR5643664 | five period of Gastrodia elata | 9.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 48.840 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 42.120 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.280 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 40.900 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 54.380 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 43.180 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 55.290 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 54.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 60.780 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 33.720 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 33.720 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.18 |
| Juven | Juvenile tuber | 5.90 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 196.46 | |
| Mother_Juven | Mother tuber of Juvenile | 39.61 |