Detail information of GWHGAAEX012225/evm.TU.scaffold_42.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672196607|ref|XP_008776847.1|6.58E-54PREDICTED: uncharacterized protein LOC103696903 [Phoenix dactylifera]
trEMBLtr|M0T466|M0T466_MUSAM2.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P04680_001}
TAIRAT5G622007.00E-43Embryo-specific protein 3, (ATS3)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000050541276542582-
Transcript Sequence

Network for GWHGAAEX012225

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06232.10ATS3551681.60E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.950
SRR2545915Juvenile tuber42.150
SRP108465SRR5643513five period of Gastrodia elata206.020
SRR5643514five period of Gastrodia elata208.430
SRR5643515five period of Gastrodia elata227.620
SRR5643524five period of Gastrodia elata181.250
SRR5643525five period of Gastrodia elata339.920
SRR5643528five period of Gastrodia elata280.900
SRR5643658five period of Gastrodia elata314.700
SRR5643659five period of Gastrodia elata236.240
SRR5643660five period of Gastrodia elata234.360
SRR5643661five period of Gastrodia elata274.920
SRR5643662five period of Gastrodia elata173.750
SRR5643663five period of Gastrodia elata258.850
SRR5643664five period of Gastrodia elata189.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1263.350
SRR6049655Rhizomagastrodiae_C368-T10_good_1228.950
SRR6049656Rhizomagastrodiae_C368-T07_good_1249.900
SRR6049657Rhizomagastrodiae_C368-T07_good_1174.050
SRR6049658Rhizomagastrodiae_C368-T04_good_1146.680
SRR6049659Rhizomagastrodiae_C368-T04_good_1117.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1112.590
SRR6049661Rhizomagastrodiae_C368-T04_good_1174.090
SRR6049662Rhizomagastrodiae_C368-T01_good_1140.100
SRR6049663Rhizomagastrodiae_C368-T01_good_1113.040
SRR6049664Rhizomagastrodiae_C368-T10_good_1227.190
SRR6049665Rhizomagastrodiae_C368-T10_good_1227.190
SRP279888GastroGastrodia elata tuber 127.48
JuvenJuvenile tuber92.10
Mother_GastroMother tuber of Gastrodia elata 67.01
Mother_JuvenMother tuber of Juvenile 39.54