Detail information of GWHGAAEX012226/evm.TU.scaffold_42.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25073.00E-49Ubiquitin regulatory protein UBXD2, contains UAS and UBX domains
nrgi|672168359|ref|XP_008804181.1|2.15E-127PREDICTED: UBX domain-containing protein 4 [Phoenix dactylifera]
trEMBLtr|M0TB01|M0TB01_MUSAM8.00E-123Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P28560_001}
TAIRAT2G431463.00E-49Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000050542691573501-
Transcript Sequence

Network for GWHGAAEX012226

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00789.19UBX2953693.50E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.240
SRR2545915Juvenile tuber47.570
SRP108465SRR5643513five period of Gastrodia elata31.740
SRR5643514five period of Gastrodia elata30.540
SRR5643515five period of Gastrodia elata32.140
SRR5643524five period of Gastrodia elata34.610
SRR5643525five period of Gastrodia elata28.700
SRR5643528five period of Gastrodia elata27.160
SRR5643658five period of Gastrodia elata30.560
SRR5643659five period of Gastrodia elata29.960
SRR5643660five period of Gastrodia elata35.110
SRR5643661five period of Gastrodia elata31.220
SRR5643662five period of Gastrodia elata32.540
SRR5643663five period of Gastrodia elata35.400
SRR5643664five period of Gastrodia elata30.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.200
SRR6049655Rhizomagastrodiae_C368-T10_good_130.860
SRR6049656Rhizomagastrodiae_C368-T07_good_137.650
SRR6049657Rhizomagastrodiae_C368-T07_good_143.820
SRR6049658Rhizomagastrodiae_C368-T04_good_152.800
SRR6049659Rhizomagastrodiae_C368-T04_good_162.900
SRR6049660Rhizomagastrodiae_C368-T01_good_147.790
SRR6049661Rhizomagastrodiae_C368-T04_good_149.460
SRR6049662Rhizomagastrodiae_C368-T01_good_139.160
SRR6049663Rhizomagastrodiae_C368-T01_good_144.240
SRR6049664Rhizomagastrodiae_C368-T10_good_139.730
SRR6049665Rhizomagastrodiae_C368-T10_good_139.730
SRP279888GastroGastrodia elata tuber 51.39
JuvenJuvenile tuber66.49
Mother_GastroMother tuber of Gastrodia elata 45.66
Mother_JuvenMother tuber of Juvenile 66.69