Gene detail

Database	Orthologs	E value	Annotation
nr	gi\|695020045\|ref\|XP_009397059.1\|	1.93E-149	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8RWJ7\|SHH2_ARATH	3.00E-110	Protein SAWADEE HOMEODOMAIN HOMOLOG 2
trEMBL	tr\|M0SQ08\|M0SQ08_MUSAM	7.00E-150	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P18450_001}
TAIR	AT3G18380	6.00E-89	sequence-specific DNA binding transcription factors;sequence-specific DNA binding

Scaffold	Start	End	Strand
GWHAAEX00000050	666407	683592	-

Transcript Sequence
>GWHTAAEX012232 ATGGGTCGACCCCCTCATAGTGGAGGCCCTGCTTTCCGCTTCACGCACAGCGAGGTTATGGAGATGGAAGCGTGCTTGCAGGATGTGAATAATTTAAATAACTCAATTCCTCCACGTGAGACAATATTAGCACTTGCAGAAAAGTTCAGTGCATCAGTTGATCGAGCTGGGAAAATGATTGTGCAGCCAAAACAGGTTTTGAATTGGTTCCAGAACAGGAGATATACCCACAAGGCAAAAGTTAAAGAACCACCAAAAAATCCGGGCATCACTCTCTTTACTCGTGATGATTCTGCTCAGTTTAGAAATGTAGCTCCACCATTTCCTGTTTCTCAAGGAAAGAATCTTTCGGAGAATGTTGAAATGGAATTTGAGGCAAAATCTGCAAGAGATGGAGCTTGGTATGATGTCTCGACCTTTTTGTCTTATAGAATGTTTGAACCCGGTGATCCGGAAGTGCGGATTCGCTTTTCTGGGTTTGGTGTTGAGGAGGATGAGTGGATAAATGTACGGAAGTGTGTCAGGCAGAGATCTCTTCCTTGTGAGGGCGCTGAATGCATTGCAGTGCTTCCTGGAGACTTGATACTATGTTTTCAGGAAGGTAAAGAGCAGGCTCTCTATTTTGATGCTCATATCCTAGATGCACAAAGAAGACGGCACGATGTTCGGGGCTGCAGGTGCCGCTTTCTCGTACGCTATGATCATGATCAGGCTGAGGAAATAGTGTCATTAAAGAAGATTTGCCGGCGCCCGGAAACCGATAGCCGGCTGGAATTCTTTCAGTCGACTGCAAAGGCAGGTGCGGGCAAATCCAATTCCGCAAAAAGGATTAGGAAACGGCGTAAATTTATCGATGTGAACAGCAGTGTGTCAACTGGAACGGCAGTGGCTGAAGAGATGACCATTGCTCTCCCTGCTGCTATCTCGAATTTGAACTCCGCTGCTGCAACATCAGCAAATCACAATGAATCAAATGGCGCAGCAGCAGCACCACAATCTCCCGTTCATCAAGATACAGTAAGAGCTGAAATTGAAGATTCATTGAATTGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00046.28	Homeobox	13	78	3.20E-05
PF16719.4	SAWADEE	121	248	2.30E-41

Protein Sequence

Gene family	subfamily
Transcription Factors Family	HB-other

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding
GO:0003682	Molecular Function	chromatin binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.510
SRP064423	SRR2545915	Juvenile tuber	58.340
SRP108465	SRR5643513	five period of Gastrodia elata	38.070
	SRR5643514	five period of Gastrodia elata	42.210
	SRR5643515	five period of Gastrodia elata	34.610
	SRR5643524	five period of Gastrodia elata	34.740
	SRR5643525	five period of Gastrodia elata	40.460
	SRR5643528	five period of Gastrodia elata	29.250
	SRR5643658	five period of Gastrodia elata	43.550
	SRR5643659	five period of Gastrodia elata	32.230
	SRR5643660	five period of Gastrodia elata	39.850
	SRR5643661	five period of Gastrodia elata	37.840
	SRR5643662	five period of Gastrodia elata	41.610
	SRR5643663	five period of Gastrodia elata	39.370
	SRR5643664	five period of Gastrodia elata	47.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.790
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	36.020
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	45.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	41.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.590
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	45.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	44.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	41.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	41.730
SRP279888	Gastro	Gastrodia elata tuber	53.99
	Juven	Juvenile tuber	61.49
	Mother_Gastro	Mother tuber of Gastrodia elata	42.81
	Mother_Juven	Mother tuber of Juvenile	42.79