Detail information of GWHGAAEX012244/evm.TU.scaffold_42.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209965522|ref|YP_002298437.1|2.00E-50peroxisomal NADH pyrophosphatase [Rhodospirillum centenum SW]
KOGKOG30841.00E-162NADH pyrophosphatase I of the Nudix family of hydrolases
nrgi|672108409|ref|XP_008785013.1|0PREDICTED: nudix hydrolase 19, chloroplastic [Phoenix dactylifera]
Swissprottr|Q94A82|NUD19_ARATH3.00E-163Nudix hydrolase 19, chloroplastic (Precursor)
trEMBLtr|M0RLT1|M0RLT1_MUSAM1.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27070_001}
TAIRAT5G200701.00E-162nudix hydrolase homolog 19

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005010086181051893+
Transcript Sequence

Network for GWHGAAEX012244

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09296.10NUDIX-like491573.30E-10
PF09297.10zf-NADH-PPase1591921.10E-06
PF00293.27NUDIX1983123.40E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03426E3.6.1.22, NUDT12, nudC Metabolic pathways map01100
Nicotinate and nicotinamide metabolismmap00760
Peroxisomemap04146

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.330
SRR2545915Juvenile tuber20.060
SRP108465SRR5643513five period of Gastrodia elata24.010
SRR5643514five period of Gastrodia elata21.720
SRR5643515five period of Gastrodia elata22.790
SRR5643524five period of Gastrodia elata23.900
SRR5643525five period of Gastrodia elata31.390
SRR5643528five period of Gastrodia elata27.730
SRR5643658five period of Gastrodia elata32.440
SRR5643659five period of Gastrodia elata24.610
SRR5643660five period of Gastrodia elata23.690
SRR5643661five period of Gastrodia elata27.380
SRR5643662five period of Gastrodia elata26.460
SRR5643663five period of Gastrodia elata26.610
SRR5643664five period of Gastrodia elata24.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.440
SRR6049655Rhizomagastrodiae_C368-T10_good_123.700
SRR6049656Rhizomagastrodiae_C368-T07_good_120.070
SRR6049657Rhizomagastrodiae_C368-T07_good_125.650
SRR6049658Rhizomagastrodiae_C368-T04_good_119.500
SRR6049659Rhizomagastrodiae_C368-T04_good_123.840
SRR6049660Rhizomagastrodiae_C368-T01_good_121.820
SRR6049661Rhizomagastrodiae_C368-T04_good_120.080
SRR6049662Rhizomagastrodiae_C368-T01_good_116.660
SRR6049663Rhizomagastrodiae_C368-T01_good_116.730
SRR6049664Rhizomagastrodiae_C368-T10_good_123.930
SRR6049665Rhizomagastrodiae_C368-T10_good_123.930
SRP279888GastroGastrodia elata tuber 30.82
JuvenJuvenile tuber32.32
Mother_GastroMother tuber of Gastrodia elata 26.13
Mother_JuvenMother tuber of Juvenile 27.81