Gene detail

Detail information of GWHGAAEX012246/evm.TU.scaffold_42.37

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695033862\|ref\|XP_009404417.1\|	5.31E-78	PREDICTED: uncharacterized protein LOC103987753 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0T6S5\|M0T6S5_MUSAM	3.00E-75	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P13770_001}
TAIR	AT3G15095	7.00E-22	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000050	1088996	1091323	-

Transcript Sequence
>GWHTAAEX012246 CATTTTTGTTACTATTCTCTTTCTCTTTACTGTCCGCTTTCTTTTTTTACCCTTATAATTTTTTAATTTTGTCAGGTGTGGTGCAGTTGGCCTCTTCTTTATTCCGAAAGGCGGCATCTGCTTGCACATGAAGGAGAGAAATGGAAGCGACAGAGAGAGGGCATCCACAGCGAAGGCGGAGCTCTTCAGGCGATATGTTTATCTGCTTCACGGCTCGGCCTTCTTCGACATGGGCGGCTAAGCGGTTGGCTTGGAAATCGCTGATGAGCCCTGGGCGCGGCCGCGATCCCTCGCCGTCGCTCTCGGCGTCTCTAAGCCGACGGCTGAGAAGTAGCGGCAGCATCAAGGGCGGGCAGTCCCCCATGTTCCCTTCTTCCGGTGCGCCACTCCCTGGAAGGAAGAAAGGCTGCGCCTTTGAGGCTGCAGAGCCGTCGTCTCCCAAAGTGACCTGCATTGGGCAGGTCCGCGTGAGGGCTAAGAAGAAGGCGGAGTCCAGATCAAGGGAGTGCTGCGGTAGCCAGAGCTGGGTTCATCAGCTTCCGCTCTGCTTTCTCCCTTGCAAGGGAGGGAGGCCGAAGGAGGAGAGCGCCGGCTCCGTCGTCGCCAAGTGGCTCTTGACGGTTCAGGAGAGCGAGGACGATCGGCCTAAGGAAGGGGAAAAGCTCCAAGTTGGGATTTTTGTGAGGGAAAGGGAGGAGAAGCTGGAGGCAGAGGACAGCGTTTCTGTTCCTCCCAGGAATGCTTTGCTGCTGATGAGGTGCAGGTCTGATCCTGTTAAAATGGCAGCTTTGGCCAACAGATTCTGGGGATCTCCGGCTGCAGAAGCTGAGATGGATTTGCTCAAGGAAGAGGCTGGAGCAGAGCTGCTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGCGGAAGAAGAGTCTTCTTCTCCATATGAAACCAAAGAAGAAGAAGAAAGCCGGGAGAAGAAAGAGGCAGCTGCCCTTTGTTTAGCAGAAAGGCGAGAAGAAGGAAAAGAGGTAGAAGAGGCAGCCCTTTGTTTGGCAGAAAGGCTAGAAGAAGGAAAAGAGGGAGAAGAGGCAGCAACCCTTTGTTTGGCAGAAAGGCGAGAAGAAGAAGGAAAAGAGGGAGAAAAGACAGCCCTCTGTTTGGCAGAAAGGCGGGAAGGAGGAGTAGAGGGAGACACAAACAATGCTTGCAAATCCAAGAAGAAAGGGGGGAGGCTTGGGAAGGAGAAGGATGCAAGAAGACACAGCTTCTCTTCTGAGAGAGACGCCAGAAGAGGGAGCTTCTCAATTTGCAAAGGAAGGAGGTGGAGCTTCTCCCTGGAAAAGGCAGACTTGGACCCATCCGATCGTGAAGAACCTCTGCCCCTCTCATCCGCAGAAGCCAAGAAGATTGAGACAGCATTGGACGAAGAAGCAGAGAGTGTGAAGCTGGCTGCTTGTGAGGTGAAAGAAGAGCTTCCCGATTGTCTCTTGATGATGATGTACGAGCCTAAGCTCTCCATGGAAGTGTCCAGAGAGACTTGGGTCTGCGGAAACGACTTTCTCAGATGGCGCCCACACAGCTCCCGCAGTCGCATGCGCTCAAACGCTTCCGAGCCTCCTGCGCCGCCGCTTTCAGAAGATGCGATGCCGGATCAAACAAAGCCGACTTCACTGCCGCCAAAGCTGCAGCCCAGGCCGGCTGCGGTTGCGCCGTACCAGCCCTTGGTTCTGACGAGATGCAAATCTGAGCCGTTGAGATCGTCGGCGAGGCTCGCACCTGACGCATGTTTCTGGAAAGACCGCCATCGCCCCATCGAAGCCGCAGGAATCGGTTTCTGATTTTTAATCGCTCGAGTTTTGGATCTGTGTGATTTTGCGTTGGCTCTCCACCTATCCATCGGTATACTTCTCTCAAAATCGCCCCTTTTTATTTATTTTTTTCTTTTTCTTTTGGATGTTCTTACTTGCATAACCCAAAGTTTCCTTTTTTTTCACGCATGCCGTAAGTTAGTATAGAATTTTTGAAATATCTGATAAAAATGTATGGTGTATGTAATTATTAAAAACTTAGTGCTGAATAGGAGAATAAAGAAGTTTGTGGTATGCATCTAAACGTTTTTTTTTAGGTTATGCCAATGGGTTGGGCTCTGTACAATAATTTAAAACAAATAATATTGTCCTTTGCTTGATATGGTAGTTGCAATCTTTCAGCAGAGGATTATAGCTCTTTTGGTAGCCATGTTTTTTATTTCTTTTTAGAGGTACGGGAACAGACTGCTATCACTCTGTTCATTAGTTTGATTGTAGGGGACTTGGATGAACGTATTAATTAGCATTATTA

Network for GWHGAAEX012246

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.780
SRP064423	SRR2545915	Juvenile tuber	4.930
SRP108465	SRR5643513	five period of Gastrodia elata	12.370
	SRR5643514	five period of Gastrodia elata	8.680
	SRR5643515	five period of Gastrodia elata	4.650
	SRR5643524	five period of Gastrodia elata	5.470
	SRR5643525	five period of Gastrodia elata	2.700
	SRR5643528	five period of Gastrodia elata	1.710
	SRR5643658	five period of Gastrodia elata	1.590
	SRR5643659	five period of Gastrodia elata	3.870
	SRR5643660	five period of Gastrodia elata	1.920
	SRR5643661	five period of Gastrodia elata	2.050
	SRR5643662	five period of Gastrodia elata	1.800
	SRR5643663	five period of Gastrodia elata	2.250
	SRR5643664	five period of Gastrodia elata	2.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.730
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.350
SRP279888	Gastro	Gastrodia elata tuber	2.19
	Juven	Juvenile tuber	9.04
	Mother_Gastro	Mother tuber of Gastrodia elata	2.44
	Mother_Juven	Mother tuber of Juvenile	3.07