Detail information of GWHGAAEX012247/evm.TU.scaffold_42.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|526797450|gb|AGR91634.1|8.09E-153NAC transcription factor 1 [Dendrobium catenatum]
Swissprottr|Q8GY42|NAC25_ARATH6.00E-70NAC transcription factor 25
trEMBLtr|A0A059PYF3|A0A059PYF3_9ASPA3.00E-153NAC transcription factor 1 {ECO:0000313|EMBL:AGR91634.1}
TAIRAT1G611102.00E-69NAC domain containing protein 25

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005011926591194198+
Transcript Sequence

Network for GWHGAAEX012247

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM772043.90E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.470
SRR2545915Juvenile tuber0.200
SRP108465SRR5643513five period of Gastrodia elata10.270
SRR5643514five period of Gastrodia elata9.170
SRR5643515five period of Gastrodia elata11.380
SRR5643524five period of Gastrodia elata5.890
SRR5643525five period of Gastrodia elata0.060
SRR5643528five period of Gastrodia elata0.310
SRR5643658five period of Gastrodia elata0.050
SRR5643659five period of Gastrodia elata1.140
SRR5643660five period of Gastrodia elata0.320
SRR5643661five period of Gastrodia elata1.600
SRR5643662five period of Gastrodia elata0.490
SRR5643663five period of Gastrodia elata0.370
SRR5643664five period of Gastrodia elata0.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.260
SRR6049655Rhizomagastrodiae_C368-T10_good_18.360
SRR6049656Rhizomagastrodiae_C368-T07_good_110.850
SRR6049657Rhizomagastrodiae_C368-T07_good_13.780
SRR6049658Rhizomagastrodiae_C368-T04_good_118.270
SRR6049659Rhizomagastrodiae_C368-T04_good_113.950
SRR6049660Rhizomagastrodiae_C368-T01_good_14.190
SRR6049661Rhizomagastrodiae_C368-T04_good_17.730
SRR6049662Rhizomagastrodiae_C368-T01_good_19.040
SRR6049663Rhizomagastrodiae_C368-T01_good_115.680
SRR6049664Rhizomagastrodiae_C368-T10_good_127.370
SRR6049665Rhizomagastrodiae_C368-T10_good_127.370
SRP279888GastroGastrodia elata tuber 0.12
JuvenJuvenile tuber0.70
Mother_GastroMother tuber of Gastrodia elata 9.71
Mother_JuvenMother tuber of Juvenile 1.97