Detail information of GWHGAAEX012248/evm.TU.scaffold_42.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743865831|ref|XP_010904917.1|5.11E-110PREDICTED: NAC transcription factor NAM-B2-like [Elaeis guineensis]
Swissprottr|Q8GY42|NAC25_ARATH3.00E-75NAC transcription factor 25
trEMBLtr|A0A077RZD5|A0A077RZD5_WHEAT1.00E-90Chromosome 3B, genomic scaffold, cultivar Chinese Spring {ECO:0000313|EMBL:CDM82556.1}
TAIRAT1G611101.00E-74NAC domain containing protein 25

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005012531771254545+
Transcript Sequence

Network for GWHGAAEX012248

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM141485.90E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.340
SRR2545915Juvenile tuber0.150
SRP108465SRR5643513five period of Gastrodia elata10.740
SRR5643514five period of Gastrodia elata12.450
SRR5643515five period of Gastrodia elata13.720
SRR5643524five period of Gastrodia elata6.060
SRR5643525five period of Gastrodia elata1.600
SRR5643528five period of Gastrodia elata1.010
SRR5643658five period of Gastrodia elata1.300
SRR5643659five period of Gastrodia elata0.870
SRR5643660five period of Gastrodia elata0.320
SRR5643661five period of Gastrodia elata0.520
SRR5643662five period of Gastrodia elata0.320
SRR5643663five period of Gastrodia elata0.150
SRR5643664five period of Gastrodia elata0.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.710
SRR6049655Rhizomagastrodiae_C368-T10_good_128.840
SRR6049656Rhizomagastrodiae_C368-T07_good_118.960
SRR6049657Rhizomagastrodiae_C368-T07_good_111.620
SRR6049658Rhizomagastrodiae_C368-T04_good_125.660
SRR6049659Rhizomagastrodiae_C368-T04_good_118.370
SRR6049660Rhizomagastrodiae_C368-T01_good_19.000
SRR6049661Rhizomagastrodiae_C368-T04_good_113.660
SRR6049662Rhizomagastrodiae_C368-T01_good_125.810
SRR6049663Rhizomagastrodiae_C368-T01_good_125.290
SRR6049664Rhizomagastrodiae_C368-T10_good_168.230
SRR6049665Rhizomagastrodiae_C368-T10_good_168.230
SRP279888GastroGastrodia elata tuber 0.68
JuvenJuvenile tuber0.74
Mother_GastroMother tuber of Gastrodia elata 23.66
Mother_JuvenMother tuber of Juvenile 5.41