Gene detail

Detail information of GWHGAAEX012252/evm.TU.scaffold_42.48

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|297569299\|ref\|YP_003690643.1\|	2.00E-45	chaperone DnaJ domain protein [Desulfurivibrio alkaliphilus AHT2]
KOG	KOG0714	8.00E-176	Molecular chaperone (DnaJ superfamily)
nr	gi\|743771451\|ref\|XP_010916015.1\|	0	PREDICTED: dnaJ homolog subfamily B member 13-like [Elaeis guineensis]
Swissprot	tr\|Q9LZK5\|DNJ19_ARATH	1.00E-48	DnaJ protein ERDJ3B (Precursor)
trEMBL	tr\|A0A0A0K5C1\|A0A0A0K5C1_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN43472.1}
TAIR	AT2G20560	8.00E-176	DNAJ heat shock family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000050	1278117	1291072	-

Transcript Sequence
>GWHTAAEX012252 TTGGGAGTAAATGGCAATGTTAATTCTATAGCATATAAGCTCTTTAGTTTATAAATGCAAATTAGCTGTATATTTTAGTATAGCTATAATGATGCCCTAACCATGACCGCACTGGGGAAGAGAACTCCAGCACTAGGAGCTCACTTTGCTGGCTGAACTGCGAGGCGGAAGGAGCGAGTGGGGTGAAAGGTGGCGGGCGCGCGATGGGAGTCGATTACTACAAGGTTCTCCAGGTTGATAGAAACGCCAAGGATGAAGATCTCAAGAAGTCCTACAGGAAGCTCGCCATGAAATGGCATCCGGACAAGAATCCAAACCACAAGAAGGAGGCTGAAGCCAAGTTTAAGCAGATATCAGAAGCCTATGAGGTCCTCAGTGACCCGCAGAAACGATCTGTCTACGATCAGTACGGCGAGGAGGGGTTGAAGGGCCAGGTTCCTCCGCCCGGGTCTTCATTTAGCGGAGGGGATGGACCCGCTACGTTTCGGTTCAATCCAAGGAATGCTGATGACATTTTTGCGGAGTTTTTTGGGTTCTCGAACCCATTTTTCGGTGGGAGTAGTGGCGCTGGGAGCACTGGAATAAGGGGTGGATCGAGATTTCCTGGCGGGATTTTTGGGGATGACTTCTTGGGCTCTCAATTCGGAGGGGAGGGATCCATGAACCCTCAGCGATCTCAAAAGGCGGCGCCTATAGAAAATCGATTGCCCTGCAGCCTGGAGGATTTGTACAAAGGGACTACTAAGAAGATGAAGATTTCGAGAGAGGTTTCTGATATAAGCGGAAAAACGACGACGGTGGAAGAAATCCTCACCATAAATATCAAGCCTGGGTGGAAGAAGGGAACGAAGATCACGTTCCCCGAGAAAGGAAATGAATCCCCGAACGTAATTCCAGCGGACATAGTCTTTGTCATTGATGAGAAACCGCACGACATGTTCTGTCGGGAGGGAAACGACCTCGTCGCGACGCAGAAGATCTCGCTTGTCGAGGCCCTCACTGGCTACACCGCCCACATCACAACACTGGATGGCCGAAGCCTGGCCATTCCCATTAGCTCTGTGATTCATCCCAGCTACGAGGAGAATGTTCCGAGTGAGGGCATGCCGATCCCCAAGGATCCGTCCCGGAAAGGGAATCTGAGAATCAGATTCAGCATCAAGTTTCCTAGCAGATTGAATGCTGAGCAGAAGGCTGGAATAAAGAAGTTGTTGGCTCCATGAGAGTTCTGTTTCTATTGATTGCTCTGTGAATATTTCCAGGCAGGTACTTGATTGCATCATATGCTGTCACAATGTTGCTTTGTGAGAAACTTGACTTTCATGACAACTTAGATTGCATTTATTTTATTTAACCCTAAGCTTGATGGGTTTGCTTGTAATGAATGAGGTTTCAAATGGCATTATTTAGCTAGTATGATTATTATTTAACATTTCATAGGTATGGCTTTCTTCACCAAGATTTTGATGTTTAACTCGCCATTTATTTTCAGTTAAAGGATTTGTAATTGCAATAATAGTGCAATTAGTCATAGAATCTCTCTTTTTTTTAGTGCTCTTAACTCTTCTTTGGAGGGTTTGTTATAAAATAATCTCTTTGTTGTGTCCTA

Network for GWHGAAEX012252

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	4	67	3.40E-27
PF01556.17	DnaJ_C	164	322	4.40E-41

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006457	Biological Process	protein folding
GO:0051082	Molecular Function	unfolded protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.970
SRP064423	SRR2545915	Juvenile tuber	31.850
SRP108465	SRR5643513	five period of Gastrodia elata	55.290
	SRR5643514	five period of Gastrodia elata	53.330
	SRR5643515	five period of Gastrodia elata	51.780
	SRR5643524	five period of Gastrodia elata	48.040
	SRR5643525	five period of Gastrodia elata	82.380
	SRR5643528	five period of Gastrodia elata	44.080
	SRR5643658	five period of Gastrodia elata	63.870
	SRR5643659	five period of Gastrodia elata	72.750
	SRR5643660	five period of Gastrodia elata	69.070
	SRR5643661	five period of Gastrodia elata	69.710
	SRR5643662	five period of Gastrodia elata	61.720
	SRR5643663	five period of Gastrodia elata	67.850
	SRR5643664	five period of Gastrodia elata	76.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	48.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	45.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	51.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	50.510
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	43.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	38.260
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	46.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	41.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	49.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.460
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	55.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	55.390
SRP279888	Gastro	Gastrodia elata tuber	56.85
	Juven	Juvenile tuber	72.52
	Mother_Gastro	Mother tuber of Gastrodia elata	34.09
	Mother_Juven	Mother tuber of Juvenile	26.51