Detail information of GWHGAAEX012253/evm.TU.scaffold_42.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428307731|ref|YP_007144556.1|7.00E-117pyridoxine 4-dehydrogenase [Crinalium epipsammum PCC 9333]
KOGKOG15752.00E-174Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
nrgi|743814040|ref|XP_010929910.1|0PREDICTED: probable aldo-keto reductase 2 [Elaeis guineensis]
Swissprottr|Q7XT99|AKR2_ORYSJ0Probable aldo-keto reductase 2
trEMBLtr|M0SYY1|M0SYY1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P16020_001}
TAIRAT1G606902.00E-174NAD(P)-linked oxidoreductase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005012923841294067-
Transcript Sequence

Network for GWHGAAEX012253

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00248.20Aldo_ket_red273151.50E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.150
SRR2545915Juvenile tuber58.400
SRP108465SRR5643513five period of Gastrodia elata46.680
SRR5643514five period of Gastrodia elata35.400
SRR5643515five period of Gastrodia elata28.910
SRR5643524five period of Gastrodia elata26.960
SRR5643525five period of Gastrodia elata43.870
SRR5643528five period of Gastrodia elata20.570
SRR5643658five period of Gastrodia elata52.510
SRR5643659five period of Gastrodia elata74.150
SRR5643660five period of Gastrodia elata69.290
SRR5643661five period of Gastrodia elata64.110
SRR5643662five period of Gastrodia elata66.840
SRR5643663five period of Gastrodia elata93.020
SRR5643664five period of Gastrodia elata121.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.810
SRR6049655Rhizomagastrodiae_C368-T10_good_119.340
SRR6049656Rhizomagastrodiae_C368-T07_good_126.680
SRR6049657Rhizomagastrodiae_C368-T07_good_135.050
SRR6049658Rhizomagastrodiae_C368-T04_good_117.790
SRR6049659Rhizomagastrodiae_C368-T04_good_117.390
SRR6049660Rhizomagastrodiae_C368-T01_good_122.640
SRR6049661Rhizomagastrodiae_C368-T04_good_122.590
SRR6049662Rhizomagastrodiae_C368-T01_good_114.410
SRR6049663Rhizomagastrodiae_C368-T01_good_110.770
SRR6049664Rhizomagastrodiae_C368-T10_good_118.310
SRR6049665Rhizomagastrodiae_C368-T10_good_118.310
SRP279888GastroGastrodia elata tuber 54.80
JuvenJuvenile tuber134.65
Mother_GastroMother tuber of Gastrodia elata 27.55
Mother_JuvenMother tuber of Juvenile 45.84