Detail information of GWHGAAEX012261/evm.TU.scaffold_42.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|590624537|ref|XP_007025630.1|4.37E-47CASP-like protein POPTRDRAFT_758901 [Theobroma cacao]
Swissprottr|B9RW00|CSPL6_RICCO3.00E-47CASP-like protein 1C1
trEMBLtr|A0A061GGI2|A0A061GGI2_THECC2.00E-47CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIRAT1G037003.00E-42Uncharacterised protein family (UPF0497)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005013592631360464+
Transcript Sequence

Network for GWHGAAEX012261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.11DUF58851462.50E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.120
SRR2545915Juvenile tuber67.050
SRP108465SRR5643513five period of Gastrodia elata30.690
SRR5643514five period of Gastrodia elata30.320
SRR5643515five period of Gastrodia elata16.480
SRR5643524five period of Gastrodia elata19.660
SRR5643525five period of Gastrodia elata23.810
SRR5643528five period of Gastrodia elata7.740
SRR5643658five period of Gastrodia elata25.060
SRR5643659five period of Gastrodia elata5.060
SRR5643660five period of Gastrodia elata5.830
SRR5643661five period of Gastrodia elata2.000
SRR5643662five period of Gastrodia elata2.050
SRR5643663five period of Gastrodia elata0.810
SRR5643664five period of Gastrodia elata3.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.710
SRR6049655Rhizomagastrodiae_C368-T10_good_154.490
SRR6049656Rhizomagastrodiae_C368-T07_good_154.420
SRR6049657Rhizomagastrodiae_C368-T07_good_147.580
SRR6049658Rhizomagastrodiae_C368-T04_good_1109.320
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.050
SRR6049660Rhizomagastrodiae_C368-T01_good_157.780
SRR6049661Rhizomagastrodiae_C368-T04_good_1114.610
SRR6049662Rhizomagastrodiae_C368-T01_good_160.610
SRR6049663Rhizomagastrodiae_C368-T01_good_175.310
SRR6049664Rhizomagastrodiae_C368-T10_good_135.090
SRR6049665Rhizomagastrodiae_C368-T10_good_135.090
SRP279888GastroGastrodia elata tuber 42.53
JuvenJuvenile tuber127.34
Mother_GastroMother tuber of Gastrodia elata 54.03
Mother_JuvenMother tuber of Juvenile 117.55