Detail information of GWHGAAEX012265/evm.TU.scaffold_42.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|476001783|gb|AGI62033.1|2.15E-105CONSTANS-like 9 [Erycina pusilla]
Swissprottr|Q9LJ44|COL12_ARATH2.00E-07Zinc finger protein CONSTANS-LIKE 12
trEMBLtr|M9QZ55|M9QZ55_9ASPA8.00E-106CONSTANS-like 9 {ECO:0000313|EMBL:AGI62033.1}
trEMBLtr|M9QZ55|M9QZ55_9ASPA3.00E-78CONSTANS-like 9 {ECO:0000313|EMBL:AGI62033.1}
TAIRAT5G534203.00E-50CCT motif family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005014706981478363+
Transcript Sequence

Network for GWHGAAEX012265

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.13CCT3954373.20E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.590
SRR2545915Juvenile tuber37.970
SRP108465SRR5643513five period of Gastrodia elata52.800
SRR5643514five period of Gastrodia elata41.780
SRR5643515five period of Gastrodia elata56.650
SRR5643524five period of Gastrodia elata36.660
SRR5643525five period of Gastrodia elata17.290
SRR5643528five period of Gastrodia elata12.260
SRR5643658five period of Gastrodia elata8.260
SRR5643659five period of Gastrodia elata54.380
SRR5643660five period of Gastrodia elata33.970
SRR5643661five period of Gastrodia elata48.800
SRR5643662five period of Gastrodia elata46.410
SRR5643663five period of Gastrodia elata43.280
SRR5643664five period of Gastrodia elata50.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_198.120
SRR6049655Rhizomagastrodiae_C368-T10_good_189.470
SRR6049656Rhizomagastrodiae_C368-T07_good_1116.900
SRR6049657Rhizomagastrodiae_C368-T07_good_177.470
SRR6049658Rhizomagastrodiae_C368-T04_good_169.670
SRR6049659Rhizomagastrodiae_C368-T04_good_150.300
SRR6049660Rhizomagastrodiae_C368-T01_good_133.210
SRR6049661Rhizomagastrodiae_C368-T04_good_197.180
SRR6049662Rhizomagastrodiae_C368-T01_good_157.620
SRR6049663Rhizomagastrodiae_C368-T01_good_130.580
SRR6049664Rhizomagastrodiae_C368-T10_good_194.040
SRR6049665Rhizomagastrodiae_C368-T10_good_194.040
SRP279888GastroGastrodia elata tuber 64.42
JuvenJuvenile tuber21.81
Mother_GastroMother tuber of Gastrodia elata 18.11
Mother_JuvenMother tuber of Juvenile 26.22