Detail information of GWHGAAEX012273/evm.TU.scaffold_42.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34186.00E-7560S ribosomal protein L27
nrgi|672119933|ref|XP_008783218.1|9.52E-84PREDICTED: 60S ribosomal protein L27-3-like [Phoenix dactylifera]
Swissprottr|P51419|RL273_ARATH2.00E-7560S ribosomal protein L27-3
trEMBLtr|B3TLV4|B3TLV4_ELAGV9.00E-8460S ribosomal protein L27 {ECO:0000256|RuleBase:RU000575}
TAIRAT4G150006.00E-75Ribosomal L27e protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005016655621678864-
Transcript Sequence

Network for GWHGAAEX012273

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01777.17Ribosomal_L27e521358.40E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02901RP-L27e, RPL27 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.550
SRR2545915Juvenile tuber46.620
SRP108465SRR5643513five period of Gastrodia elata50.050
SRR5643514five period of Gastrodia elata54.300
SRR5643515five period of Gastrodia elata49.540
SRR5643524five period of Gastrodia elata54.570
SRR5643525five period of Gastrodia elata21.560
SRR5643528five period of Gastrodia elata28.400
SRR5643658five period of Gastrodia elata20.130
SRR5643659five period of Gastrodia elata58.010
SRR5643660five period of Gastrodia elata57.150
SRR5643661five period of Gastrodia elata62.730
SRR5643662five period of Gastrodia elata49.420
SRR5643663five period of Gastrodia elata50.080
SRR5643664five period of Gastrodia elata48.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.240
SRR6049655Rhizomagastrodiae_C368-T10_good_133.090
SRR6049656Rhizomagastrodiae_C368-T07_good_151.990
SRR6049657Rhizomagastrodiae_C368-T07_good_137.630
SRR6049658Rhizomagastrodiae_C368-T04_good_133.730
SRR6049659Rhizomagastrodiae_C368-T04_good_134.800
SRR6049660Rhizomagastrodiae_C368-T01_good_136.640
SRR6049661Rhizomagastrodiae_C368-T04_good_132.200
SRR6049662Rhizomagastrodiae_C368-T01_good_151.540
SRR6049663Rhizomagastrodiae_C368-T01_good_148.360
SRR6049664Rhizomagastrodiae_C368-T10_good_161.490
SRR6049665Rhizomagastrodiae_C368-T10_good_161.490
SRP279888GastroGastrodia elata tuber 38.41
JuvenJuvenile tuber36.54
Mother_GastroMother tuber of Gastrodia elata 27.07
Mother_JuvenMother tuber of Juvenile 29.34