Gene detail

Detail information of GWHGAAEX012277/evm.TU.scaffold_42.75

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|110637313\|ref\|YP_677520.1\|	2.00E-07	hypothetical protein CHU_0899 [Cytophaga hutchinsonii ATCC 33406]
KOG	KOG1021	0	Acetylglucosaminyltransferase EXT1/exostosin 1
nr	gi\|672107331\|ref\|XP_008805667.1\|	0	PREDICTED: probable glycosyltransferase At3g07620 [Phoenix dactylifera]
Swissprot	tr\|Q9FFN2\|GLYT3_ARATH	6.00E-94	Probable glycosyltransferase At5g03795
trEMBL	tr\|A0A068U466\|A0A068U466_COFCA	0	Coffea canephora
TAIR	AT5G19670	0	Exostosin family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000050	1727789	1731238	-

Transcript Sequence
>GWHTAAEX012277 ATGGATGGCTATATTCTCATGCTTCAATTGCTGCACAAAATCAGAAGTAGAAGGATGGTTTCAATCATTGGTTTGATTGTTACTGTTGTTTTAATTCTTCAAACCTTCACACTTTCCTCTAGGATTTCTTTTTCACCCCTTTTTCCTTCTTCGAAATTACCTGCAACTAATGAGCGGAGCTCGCTGAGTAAGGAAATAGGTCATGGTTTTGGGATCAAAGAGATGGTCGGAGAATTGGAGAATTATGAAGATTCAGTTGGTGATATTGACTTGAATGAAGATGACGAGTTTAATACAGAATTCTCCATCGATCCTGTGGATGACAACATATTAAAGATTGCTAAGGATTCAAAAGAAAGTTTTACTTTTCTATCCAATGACAATAGCAATGAAAATACCCCTTTGCTGGTTGAACAAGTAGGAATTCAAGGTAATGAACAAAAAAACACTCAAGAAACATTTAGTGTGGATTCCGGCTCCGATGCCAAACTCTCAGTGCCTATTAAATCAGCAGCAGAAGTTTCAGTTTTACAAGATTTGCGGAAAAAACATACACTTAATGATGAAACATTAGTATCTGCAAAGAATGCACTAACAGTTTTACATGCCAACGAAAGTACTGCTAGCACCTTGAGGAAAAAGAAGGTGCTGGAGATGCCTCCACTATCAATGTCTGAAATGAACATGCTGCTGCTTAAAAATCGTGCTTCACGCCGCTCAATGAGACCAAGATGGTCATCTGTAGTTGACAAGCAAATATTGGCTGCCAAGAAAGAGATCGAAAATGCTCCACCTGTAGAAAATGATGATGTCCTCTTTCCTCCATTGTTCCGAGACATTTCAAAATTTAAAAGGAGCTATGAACTGATGGAAAAATCTCTTAAGATCTATGTTTATCAAGAAGGAAAAAAGCCAGTATTCCACCAACCACTCCTTGGGAGCATTTATGCATCTGAAGGATGGTTTATGAAGCTTTTGGAGAGCAATAATCACTACATAGTGAAGGATCCCAGTCAGGCTCATCTCTTCTACTTGCCATTCAGTTCTCGTTTTCTGCAGACATCATTGTATGCTGCCAACTCTTACAACCGAACATACTTGAGAAAACATCTCAAGAACTATGTAGATTTGATTTCAGCAAAGTATCCTTTCTGGAATAGAACTGGCGGTGCCGACCATTTTCTTGTTGCTTGCCACGACTGGGCAATCTACGAAACAAAGAAAACCATGGAACGCAGCATCCGCGCGCTCTGCGTAGCAGACCTCAGCATCGGATTCCAGCTAGGCAAAGACGTCACCCTTCCCGAGACCTTCATCCGTTCGCCGAAGAATCCTCTGAAAGATCTCGGCGGAAAGCCATGGAACCAAAGGCATTTTCTTTGCTTCTACGCCGGAAGCCTGCACGGCGGACTGCGCCCCGTTCTGCTGAAGCACTGGGAGAAGAAAGACCCCCGAATGAAGATCTTCAGCCCTTCCGCATTTCGCGCGGAGAGGAGCAAGATGAGCTATGCCCAGTACATGAAGAGCAGCAAATACTGCCTCTGTCCGAGGGGCTACGAGGCAAACAGCCCTAGATTGGTCGAGTCCATCTTCTTCGAATGCGTGCCTGTGATCATAGCCGACAATTACGTGCCTCCTTTCTTCGAGATACTGAACTGGGAGAAGTTCTCCGTCATTATTCCCGAGAAGGATGTTCCGAAACTCCGGGAAATTCTGGGTTCAATTTCTGAGGCTGATTACAGAGAGCTGCAGGCAGGAGTGAGGAAGGTGCAGCAGCAATTTCTGTGGCATAGCAAGCCTGTGAAGTATGATTTGTTTCATATGATACTTCACTCCATCTGGTTCAGTAGAGTTTATAATATAAAGCCCAGACCCCTTTCACTTCGGTTCTTCACTTCGGTTCACACTTCGAGAAAATCTCGCTCTGGTGTCCTTCCCATCCAGCTCGCAGAGTGCCGAGACGCTGAGCACCACTTTAGCGACATGATGCGGTCTAGCTGTTGCTCTTGTAACGAACATCTTCGTCCGGCTTGA

Network for GWHGAAEX012277

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03016.14	Exostosin	291	574	1.80E-61

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.880
SRP064423	SRR2545915	Juvenile tuber	10.750
SRP108465	SRR5643513	five period of Gastrodia elata	2.320
	SRR5643514	five period of Gastrodia elata	1.180
	SRR5643515	five period of Gastrodia elata	1.550
	SRR5643524	five period of Gastrodia elata	0.960
	SRR5643525	five period of Gastrodia elata	5.890
	SRR5643528	five period of Gastrodia elata	2.420
	SRR5643658	five period of Gastrodia elata	3.140
	SRR5643659	five period of Gastrodia elata	14.810
	SRR5643660	five period of Gastrodia elata	9.290
	SRR5643661	five period of Gastrodia elata	8.100
	SRR5643662	five period of Gastrodia elata	13.630
	SRR5643663	five period of Gastrodia elata	17.000
	SRR5643664	five period of Gastrodia elata	14.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.150
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.430
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.550
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.160
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.160
SRP279888	Gastro	Gastrodia elata tuber	10.19
	Juven	Juvenile tuber	6.56
	Mother_Gastro	Mother tuber of Gastrodia elata	5.27
	Mother_Juven	Mother tuber of Juvenile	3.22