Detail information of GWHGAAEX012278/evm.TU.scaffold_42.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695068220|ref|XP_009381046.1|2.59E-107PREDICTED: uncharacterized protein LOC103969276 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RLK3|M0RLK3_MUSAM5.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P26290_001}
TAIRAT3G228103.00E-59Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005017601861762395-
Transcript Sequence

Network for GWHGAAEX012278

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05703.10Auxin_canalis23836.10E-11
PF05703.10Auxin_canalis902391.10E-52
PF08458.9PH_22643664.50E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.970
SRR2545915Juvenile tuber0.380
SRP108465SRR5643513five period of Gastrodia elata1.290
SRR5643514five period of Gastrodia elata2.310
SRR5643515five period of Gastrodia elata0.560
SRR5643524five period of Gastrodia elata0.860
SRR5643525five period of Gastrodia elata212.450
SRR5643528five period of Gastrodia elata30.320
SRR5643658five period of Gastrodia elata194.400
SRR5643659five period of Gastrodia elata1.550
SRR5643660five period of Gastrodia elata0.810
SRR5643661five period of Gastrodia elata0.550
SRR5643662five period of Gastrodia elata3.600
SRR5643663five period of Gastrodia elata2.410
SRR5643664five period of Gastrodia elata9.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.190
SRR6049655Rhizomagastrodiae_C368-T10_good_13.590
SRR6049656Rhizomagastrodiae_C368-T07_good_12.670
SRR6049657Rhizomagastrodiae_C368-T07_good_15.690
SRR6049658Rhizomagastrodiae_C368-T04_good_16.950
SRR6049659Rhizomagastrodiae_C368-T04_good_15.240
SRR6049660Rhizomagastrodiae_C368-T01_good_17.510
SRR6049661Rhizomagastrodiae_C368-T04_good_14.830
SRR6049662Rhizomagastrodiae_C368-T01_good_12.470
SRR6049663Rhizomagastrodiae_C368-T01_good_12.780
SRR6049664Rhizomagastrodiae_C368-T10_good_12.690
SRR6049665Rhizomagastrodiae_C368-T10_good_12.690
SRP279888GastroGastrodia elata tuber 12.16
JuvenJuvenile tuber0.85
Mother_GastroMother tuber of Gastrodia elata 0.93
Mother_JuvenMother tuber of Juvenile 0.29