Detail information of GWHGAAEX012281/evm.TU.scaffold_42.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743771193|ref|XP_010915883.1|6.68E-143PREDICTED: auxin-responsive protein IAA17-like [Elaeis guineensis]
Swissprottr|Q9ZSY8|IAA27_ARATH3.00E-101Auxin-responsive protein IAA27
trEMBLtr|G9C9B5|G9C9B5_MUSAC5.00E-134Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIRAT4G290801.00E-100phytochrome-associated protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005018389921845691-
Transcript Sequence

Network for GWHGAAEX012281

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA292773.30E-87
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.010
SRR2545915Juvenile tuber97.580
SRP108465SRR5643513five period of Gastrodia elata118.100
SRR5643514five period of Gastrodia elata179.550
SRR5643515five period of Gastrodia elata140.330
SRR5643524five period of Gastrodia elata144.190
SRR5643525five period of Gastrodia elata247.400
SRR5643528five period of Gastrodia elata111.260
SRR5643658five period of Gastrodia elata266.290
SRR5643659five period of Gastrodia elata74.230
SRR5643660five period of Gastrodia elata57.940
SRR5643661five period of Gastrodia elata67.940
SRR5643662five period of Gastrodia elata79.410
SRR5643663five period of Gastrodia elata120.460
SRR5643664five period of Gastrodia elata89.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1150.170
SRR6049655Rhizomagastrodiae_C368-T10_good_1107.920
SRR6049656Rhizomagastrodiae_C368-T07_good_1137.620
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.370
SRR6049658Rhizomagastrodiae_C368-T04_good_176.360
SRR6049659Rhizomagastrodiae_C368-T04_good_148.710
SRR6049660Rhizomagastrodiae_C368-T01_good_183.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1114.920
SRR6049662Rhizomagastrodiae_C368-T01_good_1168.470
SRR6049663Rhizomagastrodiae_C368-T01_good_179.390
SRR6049664Rhizomagastrodiae_C368-T10_good_1141.940
SRR6049665Rhizomagastrodiae_C368-T10_good_1141.940
SRP279888GastroGastrodia elata tuber 174.84
JuvenJuvenile tuber54.53
Mother_GastroMother tuber of Gastrodia elata 23.39
Mother_JuvenMother tuber of Juvenile 20.17