Detail information of GWHGAAEX012283/evm.TU.scaffold_42.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800354|ref|XP_010925897.1|9.25E-80PREDICTED: transcription factor bHLH68-like [Elaeis guineensis]
Swissprottr|Q8S3D1|BH068_ARATH1.00E-43Transcription factor bHLH68
trEMBLtr|C6TAD6|C6TAD6_SOYBN7.00E-72Putative uncharacterized protein {ECO:0000313|EMBL:ACU18788.1}
TAIRAT4G29100_22.00E-43Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005019716041976543+
Transcript Sequence

Network for GWHGAAEX012283

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.060
SRR2545915Juvenile tuber11.420
SRP108465SRR5643513five period of Gastrodia elata4.530
SRR5643514five period of Gastrodia elata7.270
SRR5643515five period of Gastrodia elata3.390
SRR5643524five period of Gastrodia elata5.350
SRR5643525five period of Gastrodia elata25.620
SRR5643528five period of Gastrodia elata14.800
SRR5643658five period of Gastrodia elata17.430
SRR5643659five period of Gastrodia elata4.750
SRR5643660five period of Gastrodia elata2.880
SRR5643661five period of Gastrodia elata4.100
SRR5643662five period of Gastrodia elata6.130
SRR5643663five period of Gastrodia elata3.910
SRR5643664five period of Gastrodia elata7.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.430
SRR6049655Rhizomagastrodiae_C368-T10_good_14.680
SRR6049656Rhizomagastrodiae_C368-T07_good_16.390
SRR6049657Rhizomagastrodiae_C368-T07_good_16.540
SRR6049658Rhizomagastrodiae_C368-T04_good_16.090
SRR6049659Rhizomagastrodiae_C368-T04_good_15.060
SRR6049660Rhizomagastrodiae_C368-T01_good_16.090
SRR6049661Rhizomagastrodiae_C368-T04_good_13.930
SRR6049662Rhizomagastrodiae_C368-T01_good_18.460
SRR6049663Rhizomagastrodiae_C368-T01_good_17.840
SRR6049664Rhizomagastrodiae_C368-T10_good_18.410
SRR6049665Rhizomagastrodiae_C368-T10_good_18.410
SRP279888GastroGastrodia elata tuber 10.04
JuvenJuvenile tuber5.07
Mother_GastroMother tuber of Gastrodia elata 14.43
Mother_JuvenMother tuber of Juvenile 6.07