Detail information of GWHGAAEX012286/evm.TU.scaffold_42.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672120108|ref|XP_008783311.1|5.59E-59PREDICTED: uncharacterized protein LOC103702598 [Phoenix dactylifera]
trEMBLtr|M0RLL0|M0RLL0_MUSAM5.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P26360_001}
TAIRAT4G289901.00E-13RNA-binding protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005020624682077532+
Transcript Sequence

Network for GWHGAAEX012286

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00641.17zf-RanBP2372633.10E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.930
SRR2545915Juvenile tuber22.450
SRP108465SRR5643513five period of Gastrodia elata34.270
SRR5643514five period of Gastrodia elata30.630
SRR5643515five period of Gastrodia elata28.550
SRR5643524five period of Gastrodia elata28.640
SRR5643525five period of Gastrodia elata24.570
SRR5643528five period of Gastrodia elata27.170
SRR5643658five period of Gastrodia elata25.620
SRR5643659five period of Gastrodia elata34.060
SRR5643660five period of Gastrodia elata43.280
SRR5643661five period of Gastrodia elata45.480
SRR5643662five period of Gastrodia elata38.810
SRR5643663five period of Gastrodia elata41.640
SRR5643664five period of Gastrodia elata48.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.840
SRR6049655Rhizomagastrodiae_C368-T10_good_151.850
SRR6049656Rhizomagastrodiae_C368-T07_good_145.750
SRR6049657Rhizomagastrodiae_C368-T07_good_141.100
SRR6049658Rhizomagastrodiae_C368-T04_good_149.490
SRR6049659Rhizomagastrodiae_C368-T04_good_147.680
SRR6049660Rhizomagastrodiae_C368-T01_good_147.410
SRR6049661Rhizomagastrodiae_C368-T04_good_141.690
SRR6049662Rhizomagastrodiae_C368-T01_good_149.890
SRR6049663Rhizomagastrodiae_C368-T01_good_151.320
SRR6049664Rhizomagastrodiae_C368-T10_good_149.040
SRR6049665Rhizomagastrodiae_C368-T10_good_149.040
SRP279888GastroGastrodia elata tuber 36.79
JuvenJuvenile tuber43.23
Mother_GastroMother tuber of Gastrodia elata 43.29
Mother_JuvenMother tuber of Juvenile 46.97