Detail information of GWHGAAEX012288/evm.TU.scaffold_42.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10876.00E-137Cytosolic sorting protein GGA2/TOM1
nrgi|743800310|ref|XP_010925873.1|0PREDICTED: target of Myb protein 1-like isoform X1 [Elaeis guineensis]
trEMBLtr|M0S9H8|M0S9H8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P19870_001}
TAIRAT3G087906.00E-137ENTH/VHS/GAT family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005020949942126637-
Transcript Sequence

Network for GWHGAAEX012288

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00790.18VHS51181.60E-33
PF03127.13GAT1972684.00E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms61.840
SRR2545915Juvenile tuber51.770
SRP108465SRR5643513five period of Gastrodia elata37.000
SRR5643514five period of Gastrodia elata35.530
SRR5643515five period of Gastrodia elata37.810
SRR5643524five period of Gastrodia elata34.170
SRR5643525five period of Gastrodia elata38.170
SRR5643528five period of Gastrodia elata38.200
SRR5643658five period of Gastrodia elata56.430
SRR5643659five period of Gastrodia elata41.740
SRR5643660five period of Gastrodia elata47.080
SRR5643661five period of Gastrodia elata43.210
SRR5643662five period of Gastrodia elata44.630
SRR5643663five period of Gastrodia elata48.860
SRR5643664five period of Gastrodia elata57.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.620
SRR6049655Rhizomagastrodiae_C368-T10_good_160.790
SRR6049656Rhizomagastrodiae_C368-T07_good_142.660
SRR6049657Rhizomagastrodiae_C368-T07_good_154.810
SRR6049658Rhizomagastrodiae_C368-T04_good_158.850
SRR6049659Rhizomagastrodiae_C368-T04_good_175.200
SRR6049660Rhizomagastrodiae_C368-T01_good_149.020
SRR6049661Rhizomagastrodiae_C368-T04_good_148.970
SRR6049662Rhizomagastrodiae_C368-T01_good_133.330
SRR6049663Rhizomagastrodiae_C368-T01_good_134.650
SRR6049664Rhizomagastrodiae_C368-T10_good_135.550
SRR6049665Rhizomagastrodiae_C368-T10_good_135.550
SRP279888GastroGastrodia elata tuber 44.53
JuvenJuvenile tuber53.74
Mother_GastroMother tuber of Gastrodia elata 33.29
Mother_JuvenMother tuber of Juvenile 34.09