Detail information of GWHGAAEX012292/evm.TU.scaffold_42.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15890302|ref|NP_355974.1|9.00E-922-hydroxyacid dehydrogenase [Agrobacterium fabrum str. C58]
KOGKOG00699.00E-142Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)
nrgi|672142423|ref|XP_008795067.1|7.83E-164PREDICTED: hydroxyphenylpyruvate reductase-like [Phoenix dactylifera]
Swissprottr|Q65CJ7|HPPR_PLESU2.00E-150Hydroxyphenylpyruvate reductase
trEMBLtr|F2DH81|F2DH81_HORVD9.00E-158Predicted protein {ECO:0000313|EMBL:BAJ94452.1}
TAIRAT1G798709.00E-142D-isomer specific 2-hydroxyacid dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005022463832249272+
Transcript Sequence

Network for GWHGAAEX012292

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00389.292-Hacid_dh413155.50E-25
PF02826.182-Hacid_dh_C1122849.80E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0051287Molecular FunctionNAD binding
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.810
SRR2545915Juvenile tuber18.630
SRP108465SRR5643513five period of Gastrodia elata49.740
SRR5643514five period of Gastrodia elata49.760
SRR5643515five period of Gastrodia elata39.990
SRR5643524five period of Gastrodia elata49.880
SRR5643525five period of Gastrodia elata38.130
SRR5643528five period of Gastrodia elata40.100
SRR5643658five period of Gastrodia elata45.030
SRR5643659five period of Gastrodia elata32.880
SRR5643660five period of Gastrodia elata0.450
SRR5643661five period of Gastrodia elata40.900
SRR5643662five period of Gastrodia elata33.080
SRR5643663five period of Gastrodia elata30.670
SRR5643664five period of Gastrodia elata35.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.220
SRR6049655Rhizomagastrodiae_C368-T10_good_158.280
SRR6049656Rhizomagastrodiae_C368-T07_good_1116.700
SRR6049657Rhizomagastrodiae_C368-T07_good_185.860
SRR6049658Rhizomagastrodiae_C368-T04_good_195.600
SRR6049659Rhizomagastrodiae_C368-T04_good_187.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1112.510
SRR6049661Rhizomagastrodiae_C368-T04_good_198.540
SRR6049662Rhizomagastrodiae_C368-T01_good_1162.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1155.990
SRR6049664Rhizomagastrodiae_C368-T10_good_1125.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1125.630
SRP279888GastroGastrodia elata tuber 63.01
JuvenJuvenile tuber82.83
Mother_GastroMother tuber of Gastrodia elata 51.96
Mother_JuvenMother tuber of Juvenile 41.63