Detail information of GWHGAAEX012298/evm.TU.scaffold_42.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19442.00E-103Peroxisomal membrane protein MPV17 and related proteins
nrgi|743771054|ref|XP_010915813.1|3.55E-122PREDICTED: protein Mpv17 isoform X2 [Elaeis guineensis]
Swissprottr|Q9ZS51|PMP22_ARATH1.00E-16Peroxisomal membrane protein PMP22
trEMBLtr|M0TRY1|M0TRY1_MUSAM3.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P19780_001}
TAIRAT3G245702.00E-103Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005027062422718420-
Transcript Sequence

Network for GWHGAAEX012298

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04117.11Mpv17_PMP221291893.20E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13348MPV17 Peroxisome map04146

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.560
SRR2545915Juvenile tuber11.600
SRP108465SRR5643513five period of Gastrodia elata24.740
SRR5643514five period of Gastrodia elata28.280
SRR5643515five period of Gastrodia elata24.340
SRR5643524five period of Gastrodia elata29.340
SRR5643525five period of Gastrodia elata26.710
SRR5643528five period of Gastrodia elata33.620
SRR5643658five period of Gastrodia elata34.370
SRR5643659five period of Gastrodia elata20.790
SRR5643660five period of Gastrodia elata19.490
SRR5643661five period of Gastrodia elata22.870
SRR5643662five period of Gastrodia elata23.030
SRR5643663five period of Gastrodia elata21.830
SRR5643664five period of Gastrodia elata22.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.070
SRR6049655Rhizomagastrodiae_C368-T10_good_125.890
SRR6049656Rhizomagastrodiae_C368-T07_good_119.600
SRR6049657Rhizomagastrodiae_C368-T07_good_116.200
SRR6049658Rhizomagastrodiae_C368-T04_good_114.020
SRR6049659Rhizomagastrodiae_C368-T04_good_114.120
SRR6049660Rhizomagastrodiae_C368-T01_good_117.360
SRR6049661Rhizomagastrodiae_C368-T04_good_115.630
SRR6049662Rhizomagastrodiae_C368-T01_good_120.840
SRR6049663Rhizomagastrodiae_C368-T01_good_117.200
SRR6049664Rhizomagastrodiae_C368-T10_good_125.520
SRR6049665Rhizomagastrodiae_C368-T10_good_125.520
SRP279888GastroGastrodia elata tuber 19.52
JuvenJuvenile tuber32.76
Mother_GastroMother tuber of Gastrodia elata 38.79
Mother_JuvenMother tuber of Juvenile 30.15