Detail information of GWHGAAEX012301/evm.TU.scaffold_42.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25467.00E-56Abl interactor ABI-1, contains SH3 domain
nrgi|695067260|ref|XP_009380543.1|1.30E-84PREDICTED: uncharacterized protein LOC103968913 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RKC4|M0RKC4_MUSAM2.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P21990_001}
TAIRAT2G462207.00E-56Uncharacterized conserved protein (DUF2358)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005027799652789074+
Transcript Sequence

Network for GWHGAAEX012301

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10184.8DUF23581532635.20E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.070
SRR2545915Juvenile tuber7.730
SRP108465SRR5643513five period of Gastrodia elata6.280
SRR5643514five period of Gastrodia elata7.360
SRR5643515five period of Gastrodia elata8.650
SRR5643524five period of Gastrodia elata10.680
SRR5643525five period of Gastrodia elata8.930
SRR5643528five period of Gastrodia elata15.930
SRR5643658five period of Gastrodia elata6.950
SRR5643659five period of Gastrodia elata11.170
SRR5643660five period of Gastrodia elata6.650
SRR5643661five period of Gastrodia elata12.770
SRR5643662five period of Gastrodia elata10.630
SRR5643663five period of Gastrodia elata7.990
SRR5643664five period of Gastrodia elata12.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.760
SRR6049655Rhizomagastrodiae_C368-T10_good_15.330
SRR6049656Rhizomagastrodiae_C368-T07_good_16.110
SRR6049657Rhizomagastrodiae_C368-T07_good_14.430
SRR6049658Rhizomagastrodiae_C368-T04_good_14.260
SRR6049659Rhizomagastrodiae_C368-T04_good_13.280
SRR6049660Rhizomagastrodiae_C368-T01_good_15.730
SRR6049661Rhizomagastrodiae_C368-T04_good_14.000
SRR6049662Rhizomagastrodiae_C368-T01_good_15.330
SRR6049663Rhizomagastrodiae_C368-T01_good_18.430
SRR6049664Rhizomagastrodiae_C368-T10_good_14.190
SRR6049665Rhizomagastrodiae_C368-T10_good_14.190
SRP279888GastroGastrodia elata tuber 5.65
JuvenJuvenile tuber12.53
Mother_GastroMother tuber of Gastrodia elata 12.91
Mother_JuvenMother tuber of Juvenile 9.25