Gene detail

Detail information of GWHGAAEX012303/evm.TU.scaffold_42.109

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743800186\|ref\|XP_010925805.1\|	0	PREDICTED: uncharacterized protein LOC105048248 [Elaeis guineensis]
Swissprot	tr\|Q9SZ67\|WRK19_ARATH	1.00E-78	Probable WRKY transcription factor 19
trEMBL	tr\|A0A067JNA5\|A0A067JNA5_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP25357.1}
TAIR	AT1G64140	1.00E-172	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000050	2818707	2825297	-

Transcript Sequence
>GWHTAAEX012303 GCAAAGTTTGCGGTATCTGCGTAAAAGCAGCGCCTTTTTTTGGATTTTCTTTCAATCAGTACTAGGTGTTAGTGTCACTCCCAGCTCTTTCTCTCTCTCTAGAGCTGGGGCGGGGTGAAACCCTAGATCTCTGGAGCAGCGATAGCTGATAGGTACTGCGCTTCTCTAAACTCAGGGTGACAGTTGTTCTAACTAAAAAATCTATCGCTCGACCCCTTCGCGCGTCTGGGAGATCGACTTCGCTTCCGCGCTTCCGCCAGACGCCGAGCCAGCTCGCCTCGCTTCCGTCCGTCCCTCTCGCCTGACTGTCCATCGTTCACCTGTCCCTCTCGCCTCTCGTCCGACTGTGCCTCTCGCCTCTCGCAAGTAGCCGTCCGTATGACTTGGCTTGATGAGTTCTTATCGTTATGAATTCAGTATCCGCCACAGTTCAAAAGCCATAAACAGTGCTATTCGCCTTTGCTTTGAAATCTCAGTCAGGTTTTGTGAGTGGAGGATGCATACACTTCTTTGGACGCTTCTTCCTCATCTTCAAGTGACAGTTGCTTTCTCTTAAATCAGTTAACTATTTGTTTTGAAGATCTTGTCAGATTAAAGTATTGTTGTAGTTCTTTTGTATTATAAATAATGGATGATAGTTCTATGCGCTTGAATCCTGCTTCCAATGTGGCTTCTTTAAACATTTTTAACCATCCAACCGGCCTTGAATCGGAGGATGCATCTCAAGTTGACACCGCACTGCGCCTTATTTCGCCGGGCATCTCTTGTGTTCATGGTTTGAACTTTAGAGGGACGAAGAGGAAGTGGAAGGATTTTAATGGAGGTATGGGTCCTGGGCTGGCTTTAGCCTTGCAATGTTCGCCATGCAGCTCTGAGACCAGCAAGAGGAGCACTGGAACTGTTTGCACAGCCTCTTCAGCTTATCCTGCTGATGAAGAGTGTTTCATGGATCTAGAGTTGAATTTCAAACTCAAACTAAATACTGAAAATACAAATTCACCAAAGGTTCATTTCATCACCACTACAAATGCAGTAGCGCCTTCTTCAAATCCTGCTATAAATCTTCAGCTGAGTTTGTCTGTTGGAGCTTCTGCATCGTCTATAACAAGTGAGCATGGTGCCCCTGCAGGAAAACATCTATTCAACCCAGAAGTGTCAGCGGTGAATTTTGCGGGGAGGATTACCGACGATGGTACGGTTTCATCGAGGTGGGAAAACGGCGGCACCTCTGGGAGCATCGAAAAGCAGAATAGCAGAAGTAATTTTGCCAAAAATTGCCAGTCTCCCGGCTGCCTGAAAGGAGCCAGGGGTGCCTCTGGACTATGCATCTCCCACGGAGGCGGGCGGAGATGTCAGAAAGTTGGTTGTCAGAAGGGAGCTGAAGGAAGGACTATATACTGCAAGGCCCATGGAGGAGGCCGACGCTGCGAGCATCTCGGCTGCACCAAAAGTGCGGAAGGCCGGACCGACTTCTGCATCGCTCACGGCGGCGGTCGCCGCTGCGGCAAGGACGACTGCATGCGAGCTGCGCGAGGTAAGTCAGGATTGTGCATAAGGCACGGCGGAGGAAAGAGGTGCCGGATGGAGAATTGCACAAAGAGCGCGGAAGGGCAGTCTGGCTTATGCATCGCTCATGGTGGAGGCAGGCGCTGCCAGTTCCCTGAATGCACGAAGGGCGCGCAGGGGAGCACCATGTACTGCAAAGCTCACGGCGGGGGGAAGAGGTGCAGCTTTCCGAACTGCAGGAAAGGCGCGGAGGGAAGCACTCTCTTGTGCAAAGGGCACGGAGGGGGGAAGCGGTGTTTGTTCGAGGGCGGCTGCACCAAGAGCGTGCATGGCGGGACTCAGTTCTGCGTCGCTCATGGCGGCGGGAAGAGGTGCGCTATTCTCGAGTGCACCAAGAGCGCTAGGGGTCGCACGGATTACTGCGTGCGGCATGGCGGGGGCAGACGGTGCCAGTCCGACGGGTGCGGGAAGAGCGCCCAGGGGAGCACTAGTTTCTGCAAGGCTCACGGAGGTGGCAAGAGGTGCGCGTGGGGCGAAGCGGGGCAGGACGTCGGCGGCGGCGCCAGCGGACCCCGCTGCGATAGATTTGCCAGGGGAAAGCTCGGCCTCTGCGCTGCTCACCATGCCCTCGTTCAGGACTGCCAGGTTCACGGCGGAGACACAATTGGAATGCTCACTGTGAATGACAATATGAAGGGGGCCAGAGCATCTTCTGTTCCAGAAGGTAGGGTTCATGGAGGCAGCCTTATGGCATTGCTGGCCGCCGGCGCCGTGTTCGATTGCCCCGAAGGTTCCCCCTCGGATGATTAGTTCTATCTAGCTTGGTTAAGTTGTTTATGTTGTTGAATCAATTTGTGTAAAGAATAAGCGGGTTGGACTGATTGTTCTCTTAGCTTTCGGGAAGATGCAAGTATATATGTATATATATTCATTCTAGGGATATCTTTGTATGTATTGTTGATTAATTTGAATTTGTATTTAGTTTTCATTGCAACTTCAGAGCTGGCTGTATTGGTTTTTACTGTATTTTGAACATGCCATTGCTGCTGACAGGTTTTAATCATGATTAAATAACGGGGGATATTAC

Network for GWHGAAEX012303

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.630
SRP064423	SRR2545915	Juvenile tuber	31.260
SRP108465	SRR5643513	five period of Gastrodia elata	42.320
	SRR5643514	five period of Gastrodia elata	40.010
	SRR5643515	five period of Gastrodia elata	35.010
	SRR5643524	five period of Gastrodia elata	36.500
	SRR5643525	five period of Gastrodia elata	83.070
	SRR5643528	five period of Gastrodia elata	40.960
	SRR5643658	five period of Gastrodia elata	83.730
	SRR5643659	five period of Gastrodia elata	54.660
	SRR5643660	five period of Gastrodia elata	62.760
	SRR5643661	five period of Gastrodia elata	62.190
	SRR5643662	five period of Gastrodia elata	82.210
	SRR5643663	five period of Gastrodia elata	74.190
	SRR5643664	five period of Gastrodia elata	109.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	68.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	56.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	88.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	95.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	108.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	76.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	83.740
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	45.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	51.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.610
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.610
SRP279888	Gastro	Gastrodia elata tuber	107.08
	Juven	Juvenile tuber	64.79
	Mother_Gastro	Mother tuber of Gastrodia elata	30.95
	Mother_Juven	Mother tuber of Juvenile	31.46