Detail information of GWHGAAEX012306/evm.TU.scaffold_42.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|379012008|ref|YP_005269820.1|8.00E-22serine/threonine-protein kinase PrkC [Acetobacterium woodii DSM 1030]
KOGKOG11870Serine/threonine protein kinase
nrgi|731402104|ref|XP_010654545.1|0PREDICTED: inactive protein kinase SELMODRAFT_444075 [Vitis vinifera]
Swissprottr|Q9C660|PEK10_ARATH1.00E-94Proline-rich receptor-like protein kinase PERK10
trEMBLtr|F6HY31|F6HY31_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59354.1}
TAIRAT3G136900Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005029295592964921+
Transcript Sequence

Network for GWHGAAEX012306

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr4166812.70E-42
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004713Molecular Functionprotein tyrosine kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.670
SRR2545915Juvenile tuber18.400
SRP108465SRR5643513five period of Gastrodia elata10.400
SRR5643514five period of Gastrodia elata11.130
SRR5643515five period of Gastrodia elata10.090
SRR5643524five period of Gastrodia elata9.970
SRR5643525five period of Gastrodia elata15.890
SRR5643528five period of Gastrodia elata9.290
SRR5643658five period of Gastrodia elata19.530
SRR5643659five period of Gastrodia elata5.970
SRR5643660five period of Gastrodia elata4.530
SRR5643661five period of Gastrodia elata7.130
SRR5643662five period of Gastrodia elata8.160
SRR5643663five period of Gastrodia elata9.710
SRR5643664five period of Gastrodia elata8.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.220
SRR6049655Rhizomagastrodiae_C368-T10_good_17.030
SRR6049656Rhizomagastrodiae_C368-T07_good_18.420
SRR6049657Rhizomagastrodiae_C368-T07_good_15.270
SRR6049658Rhizomagastrodiae_C368-T04_good_12.790
SRR6049659Rhizomagastrodiae_C368-T04_good_12.310
SRR6049660Rhizomagastrodiae_C368-T01_good_15.050
SRR6049661Rhizomagastrodiae_C368-T04_good_15.310
SRR6049662Rhizomagastrodiae_C368-T01_good_18.730
SRR6049663Rhizomagastrodiae_C368-T01_good_16.590
SRR6049664Rhizomagastrodiae_C368-T10_good_18.870
SRR6049665Rhizomagastrodiae_C368-T10_good_18.870
SRP279888GastroGastrodia elata tuber 5.29
JuvenJuvenile tuber3.27
Mother_GastroMother tuber of Gastrodia elata 3.68
Mother_JuvenMother tuber of Juvenile 1.48