Detail information of GWHGAAEX012307/evm.TU.scaffold_42.113


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29451.00E-60Predicted RNA-binding protein
nrgi|695046172|ref|XP_009410905.1|1.54E-92PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TKJ4|M0TKJ4_MUSAM6.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P25080_001}
TAIRAT4G175201.00E-60Hyaluronan / mRNA binding family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005029675202975407+
Transcript Sequence

Network for GWHGAAEX012307

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09598.9Stm1_N1731.50E-14
PF04774.14HABP4_PAI-RBP11602712.80E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms321.170
SRR2545915Juvenile tuber290.980
SRP108465SRR5643513five period of Gastrodia elata392.920
SRR5643514five period of Gastrodia elata334.910
SRR5643515five period of Gastrodia elata341.450
SRR5643524five period of Gastrodia elata344.690
SRR5643525five period of Gastrodia elata239.340
SRR5643528five period of Gastrodia elata200.460
SRR5643658five period of Gastrodia elata160.830
SRR5643659five period of Gastrodia elata439.530
SRR5643660five period of Gastrodia elata457.520
SRR5643661five period of Gastrodia elata466.230
SRR5643662five period of Gastrodia elata398.540
SRR5643663five period of Gastrodia elata390.670
SRR5643664five period of Gastrodia elata444.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1329.800
SRR6049655Rhizomagastrodiae_C368-T10_good_1331.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1349.850
SRR6049657Rhizomagastrodiae_C368-T07_good_1329.530
SRR6049658Rhizomagastrodiae_C368-T04_good_1303.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1282.190
SRR6049660Rhizomagastrodiae_C368-T01_good_1332.960
SRR6049661Rhizomagastrodiae_C368-T04_good_1298.340
SRR6049662Rhizomagastrodiae_C368-T01_good_1355.090
SRR6049663Rhizomagastrodiae_C368-T01_good_1339.850
SRR6049664Rhizomagastrodiae_C368-T10_good_1411.920
SRR6049665Rhizomagastrodiae_C368-T10_good_1411.920
SRP279888GastroGastrodia elata tuber 433.31
JuvenJuvenile tuber475.05
Mother_GastroMother tuber of Gastrodia elata 180.96
Mother_JuvenMother tuber of Juvenile 286.53