Detail information of GWHGAAEX012311/evm.TU.scaffold_42.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00487.00E-68Transcription factor, Myb superfamily
nrgi|743795453|ref|XP_010924471.1|5.90E-71PREDICTED: transcription factor RAX2-like [Elaeis guineensis]
Swissprottr|Q9SJL7|RAX2_ARATH2.00E-68Transcription factor RAX2
trEMBLtr|A0A061GIZ2|A0A061GIZ2_THECC5.00E-71Myb domain protein 84, putative {ECO:0000313|EMBL:EOY29840.1}
TAIRAT2G368907.00E-68Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005031361733137499-
Transcript Sequence

Network for GWHGAAEX012311

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14622.70E-12
PF00249.30Myb_DNA-binding681114.00E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.010
SRR2545915Juvenile tuber6.870
SRP108465SRR5643513five period of Gastrodia elata11.680
SRR5643514five period of Gastrodia elata11.920
SRR5643515five period of Gastrodia elata21.880
SRR5643524five period of Gastrodia elata13.580
SRR5643525five period of Gastrodia elata3.040
SRR5643528five period of Gastrodia elata2.250
SRR5643658five period of Gastrodia elata0.900
SRR5643659five period of Gastrodia elata3.720
SRR5643660five period of Gastrodia elata0.130
SRR5643661five period of Gastrodia elata1.070
SRR5643662five period of Gastrodia elata5.310
SRR5643663five period of Gastrodia elata2.510
SRR5643664five period of Gastrodia elata6.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.510
SRR6049655Rhizomagastrodiae_C368-T10_good_12.880
SRR6049656Rhizomagastrodiae_C368-T07_good_13.600
SRR6049657Rhizomagastrodiae_C368-T07_good_12.850
SRR6049658Rhizomagastrodiae_C368-T04_good_14.920
SRR6049659Rhizomagastrodiae_C368-T04_good_14.230
SRR6049660Rhizomagastrodiae_C368-T01_good_19.330
SRR6049661Rhizomagastrodiae_C368-T04_good_15.440
SRR6049662Rhizomagastrodiae_C368-T01_good_118.180
SRR6049663Rhizomagastrodiae_C368-T01_good_117.890
SRR6049664Rhizomagastrodiae_C368-T10_good_15.830
SRR6049665Rhizomagastrodiae_C368-T10_good_15.830
SRP279888GastroGastrodia elata tuber 2.60
JuvenJuvenile tuber7.16
Mother_GastroMother tuber of Gastrodia elata 32.49
Mother_JuvenMother tuber of Juvenile 82.49