Detail information of GWHGAAEX012312/evm.TU.scaffold_42.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15952.00E-101CCCH-type Zn-finger protein
nrgi|743799530|ref|XP_010925500.1|1.36E-143PREDICTED: zinc finger CCCH domain-containing protein 2-like [Elaeis guineensis]
Swissprottr|Q9FU27|C3H2_ORYSJ4.00E-114Zinc finger CCCH domain-containing protein 2
trEMBLtr|M0RM15|M0RM15_MUSAM2.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27910_001}
TAIRAT4G291902.00E-101Zinc finger C-x8-C-x5-C-x3-H type family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005032216173222717-
Transcript Sequence

Network for GWHGAAEX012312

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00642.23zf-CCCH1211412.40E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms92.380
SRR2545915Juvenile tuber133.740
SRP108465SRR5643513five period of Gastrodia elata203.710
SRR5643514five period of Gastrodia elata123.700
SRR5643515five period of Gastrodia elata191.600
SRR5643524five period of Gastrodia elata106.980
SRR5643525five period of Gastrodia elata51.150
SRR5643528five period of Gastrodia elata15.300
SRR5643658five period of Gastrodia elata43.200
SRR5643659five period of Gastrodia elata260.810
SRR5643660five period of Gastrodia elata275.700
SRR5643661five period of Gastrodia elata372.150
SRR5643662five period of Gastrodia elata271.800
SRR5643663five period of Gastrodia elata233.640
SRR5643664five period of Gastrodia elata376.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1227.960
SRR6049655Rhizomagastrodiae_C368-T10_good_1191.620
SRR6049656Rhizomagastrodiae_C368-T07_good_1165.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1200.540
SRR6049658Rhizomagastrodiae_C368-T04_good_1223.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1222.860
SRR6049660Rhizomagastrodiae_C368-T01_good_1195.170
SRR6049661Rhizomagastrodiae_C368-T04_good_1203.370
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1118.310
SRR6049664Rhizomagastrodiae_C368-T10_good_1148.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1148.340
SRP279888GastroGastrodia elata tuber 268.32
JuvenJuvenile tuber208.30
Mother_GastroMother tuber of Gastrodia elata 212.08
Mother_JuvenMother tuber of Juvenile 206.43