Detail information of GWHGAAEX012317/evm.TU.scaffold_42.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|242047404|ref|XP_002461448.1|2.76E-15hypothetical protein SORBIDRAFT_02g002820 [Sorghum bicolor]
Swissprottr|C0LGQ9|Y4294_ARATH7.00E-13Probable LRR receptor-like serine/threonine-protein kinase At4g20940
trEMBLtr|C5X9H3|C5X9H3_SORBI1.00E-15Putative uncharacterized protein Sb02g002820 {ECO:0000313|EMBL:EER97969.1}
TAIRAT4G209402.00E-12Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005033454013345729-
Transcript Sequence

Network for GWHGAAEX012317

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.11LRRNT_234620.00012
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.840
SRR2545915Juvenile tuber57.990
SRP108465SRR5643513five period of Gastrodia elata3.930
SRR5643514five period of Gastrodia elata4.130
SRR5643515five period of Gastrodia elata6.030
SRR5643524five period of Gastrodia elata7.590
SRR5643525five period of Gastrodia elata3.750
SRR5643528five period of Gastrodia elata4.090
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata9.700
SRR5643660five period of Gastrodia elata3.500
SRR5643661five period of Gastrodia elata4.610
SRR5643662five period of Gastrodia elata8.640
SRR5643663five period of Gastrodia elata7.490
SRR5643664five period of Gastrodia elata22.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.710
SRR6049655Rhizomagastrodiae_C368-T10_good_129.320
SRR6049656Rhizomagastrodiae_C368-T07_good_116.600
SRR6049657Rhizomagastrodiae_C368-T07_good_113.920
SRR6049658Rhizomagastrodiae_C368-T04_good_121.050
SRR6049659Rhizomagastrodiae_C368-T04_good_122.100
SRR6049660Rhizomagastrodiae_C368-T01_good_119.860
SRR6049661Rhizomagastrodiae_C368-T04_good_133.590
SRR6049662Rhizomagastrodiae_C368-T01_good_117.120
SRR6049663Rhizomagastrodiae_C368-T01_good_136.590
SRR6049664Rhizomagastrodiae_C368-T10_good_112.490
SRR6049665Rhizomagastrodiae_C368-T10_good_112.490
SRP279888GastroGastrodia elata tuber 1.41
JuvenJuvenile tuber6.09
Mother_GastroMother tuber of Gastrodia elata 50.35
Mother_JuvenMother tuber of Juvenile 9.39