Detail information of GWHGAAEX012318/evm.TU.scaffold_42.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159042302|ref|YP_001541554.1|6.00E-39metallophosphoesterase [Caldivirga maquilingensis IC-167]
KOGKOG03710Serine/threonine protein phosphatase 2A, catalytic subunit
nrgi|743755163|ref|XP_010936554.1|0PREDICTED: serine/threonine-protein phosphatase PP2A-1 catalytic subunit [Elaeis guineensis]
Swissprottr|Q0DBD3|PP2A1_ORYSJ0Serine/threonine-protein phosphatase PP2A-1 catalytic subunit
trEMBLtr|B9IEI9|B9IEI9_POPTR0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIRAT1G104300protein phosphatase 2A-2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005033476503360768-
Transcript Sequence

Network for GWHGAAEX012318

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00149.27Metallophos482391.70E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04382PPP2C mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Autophagy - othermap04136
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.490
SRR2545915Juvenile tuber57.030
SRP108465SRR5643513five period of Gastrodia elata87.060
SRR5643514five period of Gastrodia elata84.420
SRR5643515five period of Gastrodia elata93.280
SRR5643524five period of Gastrodia elata79.030
SRR5643525five period of Gastrodia elata119.130
SRR5643528five period of Gastrodia elata82.810
SRR5643658five period of Gastrodia elata87.130
SRR5643659five period of Gastrodia elata87.750
SRR5643660five period of Gastrodia elata95.500
SRR5643661five period of Gastrodia elata91.460
SRR5643662five period of Gastrodia elata92.520
SRR5643663five period of Gastrodia elata88.890
SRR5643664five period of Gastrodia elata95.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_190.410
SRR6049655Rhizomagastrodiae_C368-T10_good_176.020
SRR6049656Rhizomagastrodiae_C368-T07_good_177.420
SRR6049657Rhizomagastrodiae_C368-T07_good_1102.880
SRR6049658Rhizomagastrodiae_C368-T04_good_195.930
SRR6049659Rhizomagastrodiae_C368-T04_good_1106.080
SRR6049660Rhizomagastrodiae_C368-T01_good_188.620
SRR6049661Rhizomagastrodiae_C368-T04_good_190.960
SRR6049662Rhizomagastrodiae_C368-T01_good_167.250
SRR6049663Rhizomagastrodiae_C368-T01_good_175.810
SRR6049664Rhizomagastrodiae_C368-T10_good_170.320
SRR6049665Rhizomagastrodiae_C368-T10_good_170.320
SRP279888GastroGastrodia elata tuber 100.42
JuvenJuvenile tuber126.66
Mother_GastroMother tuber of Gastrodia elata 196.17
Mother_JuvenMother tuber of Juvenile 223.79