Gene detail

Detail information of GWHGAAEX012319/evm.TU.scaffold_42.126

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|118575674\|ref\|YP_875417.1\|	1.00E-178	aminopeptidase N [Cenarchaeum symbiosum A]
KOG	KOG1046	0	Puromycin-sensitive aminopeptidase and related aminopeptidases
nr	gi\|743769768\|ref\|XP_010915175.1\|	0	PREDICTED: aminopeptidase M1-like [Elaeis guineensis]
Swissprot	tr\|Q8VZH2\|APM1_ARATH	0	Aminopeptidase M1
trEMBL	tr\|D7STT1\|D7STT1_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI20680.3}
TAIR	AT4G33090	0	aminopeptidase M1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000050	3373740	3424534	-

Transcript Sequence
>GWHTAAEX012319 ATGGCGGAATCGCAGAGCATAGAGCATTTCAAATGTCAAGCGCGCCTCCCCAAGTTCGCCATCCCAAAGCGATACGTTATCTTCCTCAAGCCCGATCTCATTGACTGCAAGTTTACTGGCTCCGTCGAGATCGCCGTCGATGTCATTGATAACACGCGTTTTTTGGTCCTGAATGCCGCCGATCTCACCGTGGAAGATGCATCGGTCTCATTTCAGGGCCACGGATCCTCTAAGGTCGTTCAGTCTAAAGTGCAACCGTCGGAGATCACCGTAGTTGAGAAGGATGAAATCTTAGTGCTTCGGTTTAGCGATGCCCTTCCGCACGGTGAAGGGATTTTGCGGATGGGGTTTGACGGATCTTTAAATGATCGAATGAAGGGGTTTTACAGAAGTGCTTATAAGCATGATGGTGACAACAAGAATATGGCGGTGACTCAATTTGAGCCGGCTGACGCCAGACGCTGCTTCCCATGTTGGGATGAGCCTGCATTCAAGGCTTCATTCACGATGACTGTGGAAGTACCTTCTGATCATGTAGCCTTGTCAAATATGCCAGTTATTAAAGAAGAAGTCAATGGTAATGTGAAGAAGCTTTTTTACCAGGAATCCCCCATTATGTCCTCCTATTTGGTTGCTGTTGTTGTGGGTTTGTTTGATTTTGTAGAGGCCTTCACAACTGATGGGATTAATGTTCGAGTATACACTCAAATCGGTAAAATTAACCAAGGAAAATTTGCTTTGGATGTAGCTGTGAAAACGTTGGACCTGTACAAAGAGTACTTCTCTGAGCCTTACCCACTCCCCAAACTTGACATGATTGCTATTCCAGATTTTGCCGCTGGTGCCATGGAAAACTATGGTTTAGTGACTTATCGAGAAACAGCACTTCTCTATGATGAACGTCACTCAGCTGCTGTGAATAAACAAAGGGTGGCAACTGTTGTTGGTCATGAATTGGCACATCAATGGTTTGGAAATCTTGTCACCATGGAATGGTGGACTCATTTATGGCTTAATGAGGGATTTGCAACATGGGTAAGTTATTTAGCCGCAGATTCTTTGTTTCCCAAATGGAAGATCTGGACACAGTTTCTTGATGATACTGTTTCTGGCCTTAGGTTGGATGCACTTGCAGAATCCCATCCTATTGAGGTTGACATAAAACATGCTAGCGAAATTGATGAAATTTTTGATGCAATCAGTTACTTAAAGGGGGCCTCTCTTATTCGAATGTTGCAATGTTTCCTAGGTGCTGAGTGTTTTCAGAAATCATTGGCTTCGTATGTGAAAAGATTTGCTTACTCCAATGCAAAGACTGAAGACTTGTGGAATGTTCTTGAGGAAGAGTCTGGTGAACCTGTGAATATGTTAATGAATTCATGGACAAAACAACAGGGTTATCCAGTTGTTCATGTGACTTTGAGGGATGGAAAATTGGAGCTTGATCAGTCTCTTTTTCTGGCAAGTGGTTCTGCAGGGGCTGGGGAGTGGATTGTTCCTATCACAGTGTGTTATGGCTCATATGAAACCACAAAAAAGTTTCTTCTAAAATCAAAAACAGACCAAATTAATGTTTCTCAATTTTTTAACTCTTCAGCTGATAATAACGGTGAACGGGTTTGGGTCAAACTCAATGTTGATCAGACAGGTTTTTATAGGGTTAAATATGTTGACGAGCTTGAAACTGGAATTATATATGCAATAGGAAATAACAAACTATCTGCAACCGACAGATTTGGGATTCTGGATGATTCGTATGCATTATGCATGGCTTCCAAGCAGAGTTTGTCATCTTTACTATCTTTAATGACAGCTTTTAGAGAAGAAACTGAGTATACTGTCATTTCTCACTTAATCACCGTAAGTTGCAAGGTTATATACATGATAGCAGATGCCAGGCCTGAGCTGTGTGATGACATAAAACAATTTGTAATTGGTCTCCTCCAGCATTCCGCAGAGAAGTTAGGTTGGGACCCAAAGGAGGGGGAGAGCCATCTGGATGCAATGCTAAGAGGAGAAATTCTGAGTGCCTTATCTCAGTTTGGGCACCCTGCCACTTGCCAAGAAGGGCTGAAGCGCTTCAATACCTTCTTGAATGATAGGGAAACCCCACTACTGTCTCCTGATACCAGACACGCTGCTTATGTTGCTGTCATACGAGCGGCTGACAGGACGAAAAAATGCGGATACGAATCTCTGCTGAAGATTTACAGAGAAACCGATCTCGGCCAGGAGAAAACCAGGATCTTGAGCTGCTTGGCATCCTCCCCTGATCCAGATATTGTTCTGGAGGCTTTAAACTTTGCTCTTTCATCAGAGGTGAGGAATCAAGATGCTGTTTTTGGGGTCGCAGGCGTAAGCAGGGAAGGGAGGGAAGTTGCTTGGAAGTGGCTGAAGGACAACTGGGACTACATCTTCAAAGCATGGGGCTCAGGGTTTCTGATAACTCGCTTTGTTAGCAGCATCGTCTCTCCGTTCTCCTCTGGTGAGAAGGCTGACGAGATTAAAGAATTTTTCGCAAGCCGGGAAACACCTGCAATCTCCAGGACCCTAAAACAGAGCCTGGAAAGAGTCGTGATCAATGCCAACTGGGCGAGAAGCATCGGCAGCGACAGCTCACTTCCTCAGTTAGTGAAGCAGCTGTCTTGTAACCTGCATTGA

Network for GWHGAAEX012319

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01433.19	Peptidase_M1	228	461	1.40E-92
PF11838.7	ERAP1_C	541	858	1.60E-87

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0008237	Molecular Function	metallopeptidase activity
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.140
SRP064423	SRR2545915	Juvenile tuber	77.300
SRP108465	SRR5643513	five period of Gastrodia elata	84.210
	SRR5643514	five period of Gastrodia elata	106.650
	SRR5643515	five period of Gastrodia elata	106.650
	SRR5643524	five period of Gastrodia elata	106.430
	SRR5643525	five period of Gastrodia elata	35.150
	SRR5643528	five period of Gastrodia elata	43.610
	SRR5643658	five period of Gastrodia elata	30.670
	SRR5643659	five period of Gastrodia elata	33.600
	SRR5643660	five period of Gastrodia elata	31.020
	SRR5643661	five period of Gastrodia elata	26.780
	SRR5643662	five period of Gastrodia elata	19.270
	SRR5643663	five period of Gastrodia elata	16.900
	SRR5643664	five period of Gastrodia elata	11.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	60.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	68.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	53.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	47.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.260
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	51.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	32.940
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	94.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	94.140
SRP279888	Gastro	Gastrodia elata tuber	17.00
	Juven	Juvenile tuber	55.59
	Mother_Gastro	Mother tuber of Gastrodia elata	37.72
	Mother_Juven	Mother tuber of Juvenile	52.56