Detail information of GWHGAAEX012324/evm.TU.scaffold_42.134


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17231126|ref|NP_487674.1|2.00E-18hypothetical protein all3634 [Nostoc sp. PCC 7120]
nrgi|695042387|ref|XP_009408845.1|0PREDICTED: GDSL esterase/lipase APG-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LU14|APG2_ARATH7.00E-171GDSL esterase/lipase APG (Precursor)
trEMBLtr|M0TFY1|M0TFY1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P08930_001}
TAIRAT3G163702.00E-170GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005034909963494840-
Transcript Sequence

Network for GWHGAAEX012324

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00657.21Lipase_GDSL323421.30E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.880
SRR2545915Juvenile tuber68.070
SRP108465SRR5643513five period of Gastrodia elata51.670
SRR5643514five period of Gastrodia elata31.440
SRR5643515five period of Gastrodia elata20.580
SRR5643524five period of Gastrodia elata25.620
SRR5643525five period of Gastrodia elata24.100
SRR5643528five period of Gastrodia elata9.960
SRR5643658five period of Gastrodia elata13.380
SRR5643659five period of Gastrodia elata3.970
SRR5643660five period of Gastrodia elata1.410
SRR5643661five period of Gastrodia elata1.730
SRR5643662five period of Gastrodia elata0.920
SRR5643663five period of Gastrodia elata0.740
SRR5643664five period of Gastrodia elata2.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.370
SRR6049655Rhizomagastrodiae_C368-T10_good_149.710
SRR6049656Rhizomagastrodiae_C368-T07_good_140.270
SRR6049657Rhizomagastrodiae_C368-T07_good_135.930
SRR6049658Rhizomagastrodiae_C368-T04_good_125.920
SRR6049659Rhizomagastrodiae_C368-T04_good_117.310
SRR6049660Rhizomagastrodiae_C368-T01_good_123.010
SRR6049661Rhizomagastrodiae_C368-T04_good_144.760
SRR6049662Rhizomagastrodiae_C368-T01_good_131.190
SRR6049663Rhizomagastrodiae_C368-T01_good_116.780
SRR6049664Rhizomagastrodiae_C368-T10_good_154.380
SRR6049665Rhizomagastrodiae_C368-T10_good_154.380
SRP279888GastroGastrodia elata tuber 1.48
JuvenJuvenile tuber4.17
Mother_GastroMother tuber of Gastrodia elata 4.61
Mother_JuvenMother tuber of Juvenile 3.03