Detail information of GWHGAAEX012338/evm.TU.scaffold_42.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17214.00E-125FOG: Zn-finger
nrgi|672118613|ref|XP_008782520.1|0PREDICTED: zinc finger protein NUTCRACKER-like [Phoenix dactylifera]
Swissprottr|Q8H1F5|IDD7_ARATH2.00E-125Protein indeterminate-domain 7 {ECO:0000303|PubMed:16784536}
trEMBLtr|M0SW74|M0SW74_MUSAM1.00E-160Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P06450_001}
TAIRAT1G551104.00E-125indeterminate(ID)-domain 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005040791864083276-
Transcript Sequence

Network for GWHGAAEX012338

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.790
SRR2545915Juvenile tuber9.390
SRP108465SRR5643513five period of Gastrodia elata57.090
SRR5643514five period of Gastrodia elata67.550
SRR5643515five period of Gastrodia elata47.510
SRR5643524five period of Gastrodia elata51.440
SRR5643525five period of Gastrodia elata2.230
SRR5643528five period of Gastrodia elata2.220
SRR5643658five period of Gastrodia elata1.970
SRR5643659five period of Gastrodia elata29.380
SRR5643660five period of Gastrodia elata26.700
SRR5643661five period of Gastrodia elata17.710
SRR5643662five period of Gastrodia elata24.820
SRR5643663five period of Gastrodia elata41.480
SRR5643664five period of Gastrodia elata52.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_180.710
SRR6049655Rhizomagastrodiae_C368-T10_good_1110.710
SRR6049656Rhizomagastrodiae_C368-T07_good_168.240
SRR6049657Rhizomagastrodiae_C368-T07_good_153.940
SRR6049658Rhizomagastrodiae_C368-T04_good_194.360
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.030
SRR6049660Rhizomagastrodiae_C368-T01_good_170.880
SRR6049661Rhizomagastrodiae_C368-T04_good_161.140
SRR6049662Rhizomagastrodiae_C368-T01_good_178.270
SRR6049663Rhizomagastrodiae_C368-T01_good_196.490
SRR6049664Rhizomagastrodiae_C368-T10_good_1118.750
SRR6049665Rhizomagastrodiae_C368-T10_good_1118.750
SRP279888GastroGastrodia elata tuber 25.80
JuvenJuvenile tuber20.80
Mother_GastroMother tuber of Gastrodia elata 10.84
Mother_JuvenMother tuber of Juvenile 3.89