Detail information of GWHGAAEX012345/evm.TU.scaffold_42.161


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|703068963|ref|XP_010088375.1|1.35E-44Dof zinc finger protein [Morus notabilis]
Swissprottr|O82155|DOF17_ARATH2.00E-32Dof zinc finger protein DOF1.7
trEMBLtr|W9QMS6|W9QMS6_9ROSA5.00E-45Dof zinc finger protein {ECO:0000313|EMBL:EXB34849.1}
TAIRAT1G517006.00E-32DOF zinc finger protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005045402394565826+
Transcript Sequence

Network for GWHGAAEX012345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof2573124.50E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.080
SRR2545915Juvenile tuber10.280
SRP108465SRR5643513five period of Gastrodia elata5.900
SRR5643514five period of Gastrodia elata6.280
SRR5643515five period of Gastrodia elata25.900
SRR5643524five period of Gastrodia elata7.350
SRR5643525five period of Gastrodia elata25.920
SRR5643528five period of Gastrodia elata29.970
SRR5643658five period of Gastrodia elata40.410
SRR5643659five period of Gastrodia elata42.130
SRR5643660five period of Gastrodia elata17.520
SRR5643661five period of Gastrodia elata35.210
SRR5643662five period of Gastrodia elata26.440
SRR5643663five period of Gastrodia elata22.780
SRR5643664five period of Gastrodia elata58.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.590
SRR6049655Rhizomagastrodiae_C368-T10_good_114.000
SRR6049656Rhizomagastrodiae_C368-T07_good_113.830
SRR6049657Rhizomagastrodiae_C368-T07_good_121.380
SRR6049658Rhizomagastrodiae_C368-T04_good_131.110
SRR6049659Rhizomagastrodiae_C368-T04_good_149.240
SRR6049660Rhizomagastrodiae_C368-T01_good_137.680
SRR6049661Rhizomagastrodiae_C368-T04_good_125.240
SRR6049662Rhizomagastrodiae_C368-T01_good_17.430
SRR6049663Rhizomagastrodiae_C368-T01_good_128.380
SRR6049664Rhizomagastrodiae_C368-T10_good_16.970
SRR6049665Rhizomagastrodiae_C368-T10_good_16.970
SRP279888GastroGastrodia elata tuber 9.27
JuvenJuvenile tuber3.60
Mother_GastroMother tuber of Gastrodia elata 41.51
Mother_JuvenMother tuber of Juvenile 11.47