Detail information of GWHGAAEX012348/evm.TU.scaffold_42.164


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17703.00E-71Translation initiation factor 1 (eIF-1/SUI1)
nrgi|743793491|ref|XP_010923943.1|4.84E-70PREDICTED: protein translation factor SUI1 homolog [Elaeis guineensis]
Swissprottr|P41568|SUI11_ARATH1.00E-71Protein translation factor SUI1 homolog 1
trEMBLtr|B3TM00|B3TM00_ELAGV2.00E-70Translational initiation factor eIF1 {ECO:0000313|EMBL:ACF06581.1}
TAIRAT4G271303.00E-71Translation initiation factor SUI1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005046211184624627-
Transcript Sequence

Network for GWHGAAEX012348

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01253.21SUI1281023.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03113EIF1, SUI1 RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0006413Biological Processtranslational initiation
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms87.660
SRR2545915Juvenile tuber47.120
SRP108465SRR5643513five period of Gastrodia elata31.150
SRR5643514five period of Gastrodia elata72.330
SRR5643515five period of Gastrodia elata56.220
SRR5643524five period of Gastrodia elata66.970
SRR5643525five period of Gastrodia elata252.460
SRR5643528five period of Gastrodia elata320.850
SRR5643658five period of Gastrodia elata163.860
SRR5643659five period of Gastrodia elata76.080
SRR5643660five period of Gastrodia elata76.360
SRR5643661five period of Gastrodia elata102.190
SRR5643662five period of Gastrodia elata114.450
SRR5643663five period of Gastrodia elata124.670
SRR5643664five period of Gastrodia elata150.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.810
SRR6049655Rhizomagastrodiae_C368-T10_good_123.090
SRR6049656Rhizomagastrodiae_C368-T07_good_137.500
SRR6049657Rhizomagastrodiae_C368-T07_good_135.290
SRR6049658Rhizomagastrodiae_C368-T04_good_150.070
SRR6049659Rhizomagastrodiae_C368-T04_good_153.930
SRR6049660Rhizomagastrodiae_C368-T01_good_156.900
SRR6049661Rhizomagastrodiae_C368-T04_good_141.920
SRR6049662Rhizomagastrodiae_C368-T01_good_154.900
SRR6049663Rhizomagastrodiae_C368-T01_good_145.400
SRR6049664Rhizomagastrodiae_C368-T10_good_153.370
SRR6049665Rhizomagastrodiae_C368-T10_good_153.370
SRP279888GastroGastrodia elata tuber 118.87
JuvenJuvenile tuber54.45
Mother_GastroMother tuber of Gastrodia elata 245.05
Mother_JuvenMother tuber of Juvenile 233.71