Detail information of GWHGAAEX012349/evm.TU.scaffold_42.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|443242924|ref|YP_007376149.1|4.00E-21ribose-phosphate pyrophosphokinase [Nonlabens dokdonensis DSW-6]
KOGKOG14480Ribose-phosphate pyrophosphokinase
nrgi|695054599|ref|XP_009415434.1|0PREDICTED: ribose-phosphate pyrophosphokinase 4 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9XGA1|KPRS4_SPIOL0Ribose-phosphate pyrophosphokinase 4
trEMBLtr|M0TTK0|M0TTK0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25470_001}
TAIRAT2G429100Phosphoribosyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005046414484681596+
Transcript Sequence

Network for GWHGAAEX012349

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00156.26Pribosyltran2162904.50E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009116Biological Processnucleoside metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.350
SRR2545915Juvenile tuber21.300
SRP108465SRR5643513five period of Gastrodia elata26.860
SRR5643514five period of Gastrodia elata36.600
SRR5643515five period of Gastrodia elata28.910
SRR5643524five period of Gastrodia elata34.780
SRR5643525five period of Gastrodia elata32.520
SRR5643528five period of Gastrodia elata40.800
SRR5643658five period of Gastrodia elata20.920
SRR5643659five period of Gastrodia elata21.220
SRR5643660five period of Gastrodia elata23.600
SRR5643661five period of Gastrodia elata22.770
SRR5643662five period of Gastrodia elata19.090
SRR5643663five period of Gastrodia elata23.560
SRR5643664five period of Gastrodia elata20.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.210
SRR6049655Rhizomagastrodiae_C368-T10_good_144.290
SRR6049656Rhizomagastrodiae_C368-T07_good_137.680
SRR6049657Rhizomagastrodiae_C368-T07_good_128.670
SRR6049658Rhizomagastrodiae_C368-T04_good_133.580
SRR6049659Rhizomagastrodiae_C368-T04_good_130.750
SRR6049660Rhizomagastrodiae_C368-T01_good_138.000
SRR6049661Rhizomagastrodiae_C368-T04_good_135.600
SRR6049662Rhizomagastrodiae_C368-T01_good_153.600
SRR6049663Rhizomagastrodiae_C368-T01_good_141.790
SRR6049664Rhizomagastrodiae_C368-T10_good_154.460
SRR6049665Rhizomagastrodiae_C368-T10_good_154.460
SRP279888GastroGastrodia elata tuber 31.32
JuvenJuvenile tuber30.40
Mother_GastroMother tuber of Gastrodia elata 43.94
Mother_JuvenMother tuber of Juvenile 36.53