Detail information of GWHGAAEX012351/evm.TU.scaffold_42.170


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800146|ref|XP_010925783.1|3.52E-81PREDICTED: ethylene-responsive transcription factor CRF2-like [Elaeis guineensis]
Swissprottr|Q9SUE3|CRF4_ARATH1.00E-46Ethylene-responsive transcription factor CRF4
trEMBLtr|M0TRY8|M0TRY8_MUSAM1.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P19850_001}
TAIRAT4G279505.00E-46cytokinin response factor 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005048305614832414-
Transcript Sequence

Network for GWHGAAEX012351

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP21101602.60E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.310
SRR2545915Juvenile tuber4.670
SRP108465SRR5643513five period of Gastrodia elata25.820
SRR5643514five period of Gastrodia elata24.930
SRR5643515five period of Gastrodia elata15.920
SRR5643524five period of Gastrodia elata19.830
SRR5643525five period of Gastrodia elata6.800
SRR5643528five period of Gastrodia elata3.250
SRR5643658five period of Gastrodia elata3.280
SRR5643659five period of Gastrodia elata17.400
SRR5643660five period of Gastrodia elata11.320
SRR5643661five period of Gastrodia elata17.050
SRR5643662five period of Gastrodia elata10.900
SRR5643663five period of Gastrodia elata7.720
SRR5643664five period of Gastrodia elata40.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.770
SRR6049655Rhizomagastrodiae_C368-T10_good_181.340
SRR6049656Rhizomagastrodiae_C368-T07_good_156.960
SRR6049657Rhizomagastrodiae_C368-T07_good_137.570
SRR6049658Rhizomagastrodiae_C368-T04_good_148.000
SRR6049659Rhizomagastrodiae_C368-T04_good_139.000
SRR6049660Rhizomagastrodiae_C368-T01_good_147.620
SRR6049661Rhizomagastrodiae_C368-T04_good_127.860
SRR6049662Rhizomagastrodiae_C368-T01_good_140.360
SRR6049663Rhizomagastrodiae_C368-T01_good_136.150
SRR6049664Rhizomagastrodiae_C368-T10_good_140.700
SRR6049665Rhizomagastrodiae_C368-T10_good_140.700
SRP279888GastroGastrodia elata tuber 5.34
JuvenJuvenile tuber64.21
Mother_GastroMother tuber of Gastrodia elata 1.67
Mother_JuvenMother tuber of Juvenile 3.92